Protein : Qrob_P0067610.2 Q. robur
Protein Identifier  ? Qrob_P0067610.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR31246:SF2 - MICROTUBULE-ASSOCIATED PROTEIN 70-1-RELATED (PTHR31246:SF2) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 641  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008017 microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
GO:0007010 cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100266222 1 599 + 599 Gaps:28 98.12 637 83.36 0.0 microtubule-associated protein 70-2-like
blastp_kegg lcl|pmum:103321338 34 599 + 566 Gaps:27 97.98 595 86.45 0.0 microtubule-associated protein 70-2-like
blastp_kegg lcl|pper:PRUPE_ppa002899mg 1 599 + 599 Gaps:32 98.07 623 83.96 0.0 hypothetical protein
blastp_kegg lcl|cmo:103493449 1 599 + 599 Gaps:30 98.10 633 83.41 0.0 microtubule-associated protein 70-1
blastp_kegg lcl|rcu:RCOM_0598030 1 599 + 599 Gaps:39 100.00 614 84.53 0.0 Myosin heavy chain clone putative
blastp_kegg lcl|mdm:103444578 1 599 + 599 Gaps:36 98.06 619 83.20 0.0 microtubule-associated protein 70-1-like
blastp_kegg lcl|csv:101212718 31 599 + 569 Gaps:30 96.75 615 84.54 0.0 microtubule-associated protein 70-1-like
blastp_kegg lcl|cit:102630104 1 599 + 599 Gaps:43 98.06 618 82.34 0.0 microtubule-associated protein 70-2-like
blastp_kegg lcl|gmx:100796575 30 599 + 570 Gaps:30 96.10 616 82.60 0.0 microtubule-associated protein 70-2-like
blastp_kegg lcl|gmx:100785173 1 599 + 599 Gaps:45 98.05 616 82.28 0.0 microtubule-associated protein 70-2-like
blastp_uniprot_sprot sp|Q9C9X0|MP701_ARATH 1 599 + 599 Gaps:43 98.07 622 76.39 0.0 Microtubule-associated protein 70-1 OS Arabidopsis thaliana GN MAP70.1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L7S4|MP702_ARATH 30 599 + 570 Gaps:31 93.85 634 75.97 0.0 Microtubule-associated protein 70-2 OS Arabidopsis thaliana GN MAP70.2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZUA3|MP703_ARATH 6 599 + 594 Gaps:42 97.93 629 72.40 0.0 Microtubule-associated protein 70-3 OS Arabidopsis thaliana GN MAP70.3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQU7|MP704_ARATH 32 600 + 569 Gaps:44 97.19 604 73.76 0.0 Microtubule-associated protein 70-4 OS Arabidopsis thaliana GN MAP70.4 PE 1 SV 1
blastp_uniprot_sprot sp|Q6Z746|MP702_ORYSJ 47 599 + 553 Gaps:29 95.49 599 75.17 0.0 Microtubule-associated protein 70-2 OS Oryza sativa subsp. japonica GN MAP70.2 PE 2 SV 1
blastp_uniprot_sprot sp|Q653N3|MP703_ORYSJ 47 592 + 546 Gaps:38 94.74 608 71.70 0.0 Microtubule-associated protein 70-3 OS Oryza sativa subsp. japonica GN MAP70.3 PE 2 SV 1
blastp_uniprot_sprot sp|Q2QLI6|MP701_ORYSJ 43 601 + 559 Gaps:51 97.71 567 74.55 0.0 Microtubule-associated protein 70-1 OS Oryza sativa subsp. japonica GN MAP70.1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GYX3|MP705_ARATH 73 568 + 496 Gaps:59 93.76 513 50.10 3e-131 Microtubule-associated protein 70-5 OS Arabidopsis thaliana GN MAP70.5 PE 1 SV 1
blastp_uniprot_sprot sp|Q10PZ6|MP704_ORYSJ 73 444 + 372 Gaps:33 77.48 515 47.62 1e-107 Microtubule-associated protein 70-4 OS Oryza sativa subsp. japonica GN MAP70.4 PE 2 SV 1
rpsblast_cdd gnl|CDD|203570 211 566 + 356 Gaps:5 100.00 351 76.35 1e-136 pfam07058 Myosin_HC-like Myosin II heavy chain-like. This family represents a conserved region within a number of myosin II heavy chain-like proteins that seem to be specific to Arabidopsis thaliana.
rpsblast_cdd gnl|CDD|162739 75 342 + 268 Gaps:34 23.75 1179 17.86 5e-08 TIGR02168 SMC_prok_B chromosome segregation protein SMC common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria archaea and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 612 634 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Coils 539 574 36 Coil none none none
Coils 271 299 29 Coil none none none
Coils 106 127 22 Coil none none none
Phobius 1 611 611 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 211 566 356 PF07058 none Myosin II heavy chain-like IPR009768
Coils 160 188 29 Coil none none none
Coils 320 355 36 Coil none none none
Coils 212 261 50 Coil none none none
Phobius 635 640 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 47 611 565 PTHR31246:SF2 none none none
Coils 79 100 22 Coil none none none
PANTHER 47 611 565 PTHR31246 none none none

1 Localization

Analysis Start End Length
TMHMM 612 634 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting