Protein : Qrob_P0066860.2 Q. robur
Protein Identifier  ? Qrob_P0066860.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR22298:SF28 - ENDOGLUCANASE 4-RELATED (PTHR22298:SF28) Code Enzyme  EC:3.2.1.4
Gene Prediction Quality  validated Protein length 

Sequence

Length: 497  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004644mg 1 495 + 495 Gaps:2 99.80 498 86.52 0.0 hypothetical protein
blastp_kegg lcl|pmum:103321421 1 495 + 495 Gaps:2 99.80 498 85.92 0.0 endoglucanase 8
blastp_kegg lcl|fve:101301481 1 495 + 495 none 99.80 496 84.04 0.0 endoglucanase 8-like
blastp_kegg lcl|tcc:TCM_010986 1 496 + 496 Gaps:1 100.00 495 84.85 0.0 Glycosyl hydrolase 9B1 isoform 1
blastp_kegg lcl|pop:POPTR_0008s13200g 1 496 + 496 Gaps:4 100.00 496 85.48 0.0 POPTRDRAFT_720067 endo-1 family protein
blastp_kegg lcl|rcu:RCOM_0628760 14 495 + 482 Gaps:1 97.76 492 85.45 0.0 endo-1 4-beta-glucanase putative (EC:3.2.1.4)
blastp_kegg lcl|cmo:103504547 19 495 + 477 Gaps:1 97.34 489 86.97 0.0 endoglucanase 8
blastp_kegg lcl|pop:POPTR_0010s11940g 30 496 + 467 none 94.15 496 87.79 0.0 POPTRDRAFT_231800 endo-1 family protein
blastp_kegg lcl|csv:101219599 19 495 + 477 Gaps:1 97.34 489 86.76 0.0 endoglucanase 8-like
blastp_kegg lcl|cam:101503965 1 496 + 496 Gaps:8 100.00 494 86.64 0.0 endoglucanase 8-like
blastp_pdb 1ksd_A 34 490 + 457 Gaps:55 97.92 433 45.52 2e-99 mol:protein length:433 Endo-b-1 4-glucanase
blastp_pdb 1ksc_A 34 490 + 457 Gaps:55 97.92 433 45.52 2e-99 mol:protein length:433 Endo-b-1 4-glucanase
blastp_pdb 1ks8_A 34 490 + 457 Gaps:55 97.92 433 45.52 2e-99 mol:protein length:433 Endo-b-1 4-glucanase
blastp_pdb 4tf4_B 35 492 + 458 Gaps:52 72.07 605 41.51 1e-81 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 4tf4_A 35 492 + 458 Gaps:52 72.07 605 41.51 1e-81 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 3tf4_B 35 492 + 458 Gaps:52 72.07 605 41.51 1e-81 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 3tf4_A 35 492 + 458 Gaps:52 72.07 605 41.51 1e-81 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 1tf4_B 35 492 + 458 Gaps:52 72.07 605 41.51 1e-81 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 1tf4_A 35 492 + 458 Gaps:52 72.07 605 41.51 1e-81 mol:protein length:605 T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMA
blastp_pdb 1js4_B 35 492 + 458 Gaps:52 72.07 605 41.51 1e-81 mol:protein length:605 ENDO/EXOCELLULASE E4
blastp_uniprot_sprot sp|Q9CAC1|GUN8_ARATH 1 495 + 495 Gaps:7 99.19 492 82.17 0.0 Endoglucanase 8 OS Arabidopsis thaliana GN CEL1 PE 2 SV 1
blastp_uniprot_sprot sp|O49296|GUN4_ARATH 18 495 + 478 none 97.75 489 79.50 0.0 Endoglucanase 4 OS Arabidopsis thaliana GN At1g23210 PE 2 SV 1
blastp_uniprot_sprot sp|Q652F9|GUN17_ORYSJ 19 496 + 478 Gaps:2 96.58 497 74.79 0.0 Endoglucanase 17 OS Oryza sativa subsp. japonica GN GLU13 PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z2J3|GUN6_ORYSJ 30 496 + 467 Gaps:3 92.52 508 74.89 0.0 Endoglucanase 6 OS Oryza sativa subsp. japonica GN Os02g0733300 PE 2 SV 1
blastp_uniprot_sprot sp|Q69NF5|GUN23_ORYSJ 34 496 + 463 Gaps:4 90.68 515 63.38 0.0 Endoglucanase 23 OS Oryza sativa subsp. japonica GN GLU12 PE 2 SV 1
blastp_uniprot_sprot sp|Q93YQ7|GUN24_ARATH 33 496 + 464 Gaps:4 94.16 497 61.11 0.0 Endoglucanase 24 OS Arabidopsis thaliana GN At4g39010 PE 2 SV 1
blastp_uniprot_sprot sp|O81416|GUN17_ARATH 32 493 + 462 none 89.53 516 61.90 0.0 Endoglucanase 17 OS Arabidopsis thaliana GN At4g02290 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LQ92|GUN3_ORYSJ 15 493 + 479 Gaps:11 98.20 499 60.41 0.0 Endoglucanase 3 OS Oryza sativa subsp. japonica GN GLU8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SRX3|GUN1_ARATH 34 493 + 460 Gaps:2 91.42 501 62.45 0.0 Endoglucanase 1 OS Arabidopsis thaliana GN CEL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6YXT7|GUN19_ORYSJ 29 493 + 465 Gaps:7 90.25 523 58.69 0.0 Endoglucanase 19 OS Oryza sativa subsp. japonica GN Os08g0114200 PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 17 494 478 SSF48208 none none IPR008928
Phobius 1 32 32 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 402 418 17 PS00592 "KEGG:00500+3.2.1.4","MetaCyc:PWY-6788" Glycosyl hydrolases family 9 active sites signature 1. IPR018221
Gene3D 33 492 460 G3DSA:1.50.10.10 none none IPR012341
Pfam 35 490 456 PF00759 "KEGG:00500+3.2.1.4","MetaCyc:PWY-6788" Glycosyl hydrolase family 9 IPR001701
PANTHER 15 496 482 PTHR22298 none none none
Phobius 1 16 16 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
ProSitePatterns 465 483 19 PS00698 "KEGG:00500+3.2.1.4","MetaCyc:PWY-6788" Glycosyl hydrolases family 9 active sites signature 2. IPR018221
Phobius 33 496 464 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 17 27 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 15 496 482 PTHR22298:SF28 none none none
Phobius 28 32 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

2 Localization

Analysis Start End Length
TMHMM 12 31 19
SignalP_EUK 1 32 31

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 32   Secretory pathway 3 0.741 0.193 NON-PLANT 32