Protein : Qrob_P0064640.2 Q. robur
Protein Identifier  ? Qrob_P0064640.2 Organism . Name  Quercus robur
Score  96.1 Score Type  egn
Protein Description  (M=2) K11314 - transcriptional adapter 2-alpha Gene Prediction Quality  validated
Protein length 

Sequence

Length: 558  
Kegg Orthology  K11314
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0006357 regulation of transcription from RNA polymerase II promoter Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
GO:0016573 histone acetylation The modification of a histone by the addition of an acetyl group.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa003649mg 25 557 + 533 Gaps:3 94.81 559 80.94 0.0 hypothetical protein
blastp_kegg lcl|pxb:103963745 32 557 + 526 Gaps:5 93.92 559 80.19 0.0 transcriptional adapter ADA2-like
blastp_kegg lcl|vvi:100266159 32 556 + 525 Gaps:8 93.49 553 81.04 0.0 transcriptional adapter ADA2b-like
blastp_kegg lcl|mdm:103434417 32 557 + 526 Gaps:7 93.94 561 79.13 0.0 transcriptional adapter ADA2b
blastp_kegg lcl|pxb:103933905 32 557 + 526 Gaps:7 93.92 559 79.81 0.0 transcriptional adapter ADA2b
blastp_kegg lcl|pmum:103326955 32 557 + 526 Gaps:3 93.90 557 81.26 0.0 transcriptional adapter ADA2
blastp_kegg lcl|tcc:TCM_030408 32 557 + 526 Gaps:11 93.64 550 81.17 0.0 ADA2 2B isoform 2
blastp_kegg lcl|rcu:RCOM_0863470 33 557 + 525 Gaps:20 93.35 541 80.79 0.0 transcriptional adaptor putative
blastp_kegg lcl|fve:101296934 32 556 + 525 Gaps:27 93.43 533 82.13 0.0 transcriptional adapter ADA2b-like
blastp_kegg lcl|cam:101514613 32 557 + 526 Gaps:4 93.76 561 74.52 0.0 transcriptional adapter ADA2-like
blastp_pdb 2elk_A 103 147 + 45 Gaps:1 79.31 58 47.83 2e-09 mol:protein length:58 SPCC24B10.08c protein
blastp_pdb 2cuj_A 451 553 + 103 Gaps:13 83.33 108 36.67 2e-07 mol:protein length:108 transcriptional adaptor 2-like
blastp_pdb 2aqf_A 480 553 + 74 none 82.22 90 35.14 6e-07 mol:protein length:90 transcriptional adaptor 2 Ada2 alpha
blastp_pdb 2aqe_A 480 553 + 74 none 82.22 90 35.14 6e-07 mol:protein length:90 Transcriptional adaptor 2 Ada2 alpha
blastp_pdb 1x41_A 102 151 + 50 Gaps:1 81.67 60 46.94 1e-06 mol:protein length:60 Transcriptional adaptor 2-like isoform b
blastp_uniprot_sprot sp|Q75LL6|TADA2_ORYSJ 43 552 + 510 Gaps:34 89.59 567 63.58 0.0 Transcriptional adapter ADA2 OS Oryza sativa subsp. japonica GN ADA2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ATB4|TAD2B_ARATH 44 556 + 513 Gaps:83 90.76 487 66.74 0.0 Transcriptional adapter ADA2b OS Arabidopsis thaliana GN ADA2B PE 1 SV 1
blastp_uniprot_sprot sp|Q9SFD5|TAD2A_ARATH 34 555 + 522 Gaps:39 92.15 548 53.47 1e-163 Transcriptional adapter ADA2a OS Arabidopsis thaliana GN ADA2A PE 1 SV 1
blastp_uniprot_sprot sp|Q02336|ADA2_YEAST 44 549 + 506 Gaps:28 97.70 434 33.25 8e-36 Transcriptional adapter 2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ADA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9P7J7|ADA2_SCHPO 44 549 + 506 Gaps:20 88.33 437 36.01 6e-33 Transcriptional adapter 2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ada2 PE 1 SV 1
blastp_uniprot_sprot sp|Q59WH0|ADA2_CANAL 38 553 + 516 Gaps:10 90.11 445 33.17 1e-32 Transcriptional adapter 2 OS Candida albicans (strain SC5314 / ATCC MYA-2876) GN ADA2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8I8V0|TAD2B_DROME 44 421 + 378 Gaps:11 44.86 555 37.75 2e-23 Transcriptional adapter 2B OS Drosophila melanogaster GN Ada2b PE 1 SV 1
blastp_uniprot_sprot sp|Q3SZP8|TAD2A_BOVIN 59 553 + 495 Gaps:11 92.55 443 31.71 1e-22 Transcriptional adapter 2-alpha OS Bos taurus GN TADA2A PE 2 SV 1
blastp_uniprot_sprot sp|O75478|TAD2A_HUMAN 59 553 + 495 Gaps:11 92.55 443 31.46 6e-22 Transcriptional adapter 2-alpha OS Homo sapiens GN TADA2A PE 1 SV 3
blastp_uniprot_sprot sp|Q8CHV6|TAD2A_MOUSE 46 553 + 508 Gaps:36 95.26 443 31.99 7e-22 Transcriptional adapter 2-alpha OS Mus musculus GN Tada2a PE 1 SV 1
rpsblast_cdd gnl|CDD|34717 44 553 + 510 Gaps:31 97.45 432 31.35 9e-35 COG5114 COG5114 Histone acetyltransferase complex SAGA/ADA subunit ADA2 [Chromatin structure and dynamics].
rpsblast_cdd gnl|CDD|30239 44 92 + 49 none 100.00 49 69.39 8e-20 cd02335 ZZ_ADA2 Zinc finger ZZ type. Zinc finger present in ADA2 a putative transcriptional adaptor and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding..
rpsblast_cdd gnl|CDD|34856 36 145 + 110 Gaps:4 19.96 531 31.13 4e-12 COG5259 RSC8 RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription].
rpsblast_cdd gnl|CDD|197842 104 148 + 45 none 91.84 49 31.11 8e-09 smart00717 SANT SANT SWI3 ADA2 N-CoR and TFIIIB'' DNA-binding domains.
rpsblast_cdd gnl|CDD|203011 488 554 + 67 Gaps:3 87.50 80 37.14 2e-08 pfam04433 SWIRM SWIRM domain. This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 274 553 280 PTHR12374:SF20 none none IPR016827
ProSiteProfiles 471 557 87 PS50934 none SWIRM domain profile. IPR007526
ProSiteProfiles 99 151 53 PS51293 none SANT domain profile. IPR017884
PIRSF 31 557 527 PIRSF025024 none none IPR016827
Phobius 12 30 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 487 554 68 PF04433 none SWIRM domain IPR007526
SUPERFAMILY 44 106 63 SSF57850 none none none
PANTHER 44 196 153 PTHR12374 none none none
PANTHER 274 553 280 PTHR12374 none none none
Gene3D 104 148 45 G3DSA:1.10.10.60 none none IPR009057
ProSitePatterns 46 73 28 PS01357 none Zinc finger ZZ-type signature. IPR000433
SUPERFAMILY 471 554 84 SSF46689 none none IPR009057
ProSiteProfiles 40 87 48 PS50135 none Zinc finger ZZ-type profile. IPR000433
Pfam 104 145 42 PF00249 none Myb-like DNA-binding domain IPR001005
SUPERFAMILY 97 151 55 SSF46689 none none IPR009057
Phobius 31 557 527 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 100 149 50 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
PANTHER 44 196 153 PTHR12374:SF20 none none IPR016827
SMART 40 84 45 SM00291 none Zinc-binding domain, present in Dystrophin, CREB-binding protein. IPR000433
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 43 84 42 PF00569 none Zinc finger, ZZ type IPR000433

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 35   Secretory pathway 1 0.981 0.007 NON-PLANT 35