Protein : Qrob_P0062430.2 Q. robur
Protein Identifier  ? Qrob_P0062430.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR10687 - SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN (SCAMP) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 178  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100795535 21 177 + 157 none 54.51 288 87.90 4e-96 secretory carrier-associated membrane protein-like
blastp_kegg lcl|cit:102621153 21 177 + 157 none 50.65 310 85.99 9e-96 putative secretory carrier-associated membrane protein 1-like
blastp_kegg lcl|gmx:100815455 21 177 + 157 none 52.68 298 87.90 1e-94 putative secretory carrier-associated membrane protein 1-like
blastp_kegg lcl|gmx:100777657 21 177 + 157 none 50.65 310 83.44 1e-94 putative secretory carrier-associated membrane protein 1-like
blastp_kegg lcl|pvu:PHAVU_002G223700g 21 177 + 157 none 54.51 288 85.99 2e-94 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G190200g 21 177 + 157 none 50.81 309 83.44 3e-94 hypothetical protein
blastp_kegg lcl|vvi:100255491 21 177 + 157 none 62.06 253 82.17 3e-92 secretory carrier-associated membrane protein 3-like
blastp_kegg lcl|pmum:103324662 21 177 + 157 none 54.33 289 82.80 3e-92 secretory carrier-associated membrane protein 3-like
blastp_kegg lcl|pper:PRUPE_ppa009511mg 21 177 + 157 none 54.33 289 82.80 3e-92 hypothetical protein
blastp_kegg lcl|pxb:103966605 21 177 + 157 none 54.14 290 81.53 4e-91 secretory carrier-associated membrane protein 3-like
blastp_uniprot_sprot sp|Q9SXA5|SCAM5_ARATH 21 177 + 157 none 53.95 291 77.07 6e-85 Secretory carrier-associated membrane protein 5 OS Arabidopsis thaliana GN SCAMP5 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M5P2|SCAM3_ARATH 21 177 + 157 none 54.33 289 75.16 6e-85 Secretory carrier-associated membrane protein 3 OS Arabidopsis thaliana GN SCAMP3 PE 1 SV 1
blastp_uniprot_sprot sp|A2YMP7|SCAM1_ORYSI 21 176 + 156 none 50.98 306 74.36 2e-82 Putative secretory carrier-associated membrane protein 1 OS Oryza sativa subsp. indica GN SCAMP1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8H5X5|SCAM1_ORYSJ 21 176 + 156 none 50.98 306 74.36 2e-82 Secretory carrier-associated membrane protein 1 OS Oryza sativa subsp. japonica GN SCAMP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7F613|SCAM2_ORYSJ 21 176 + 156 none 54.55 286 74.36 1e-80 Secretory carrier-associated membrane protein 2 OS Oryza sativa subsp. japonica GN SCAMP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZTX0|SCAM_PEA 21 167 + 147 none 50.87 289 85.03 3e-80 Secretory carrier-associated membrane protein OS Pisum sativum GN PSAM2 PE 2 SV 1
blastp_uniprot_sprot sp|Q60EA5|SCAM3_ORYSJ 21 177 + 157 none 55.67 282 74.52 4e-80 Secretory carrier-associated membrane protein 3 OS Oryza sativa subsp. japonica GN SCAMP3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKT3|SCAM1_ARATH 21 177 + 157 none 55.67 282 75.80 2e-74 Secretory carrier-associated membrane protein 1 OS Arabidopsis thaliana GN SCAMP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q75IC7|SCAM4_ORYSJ 21 165 + 145 none 46.33 313 69.66 3e-70 Secretory carrier-associated membrane protein 4 OS Oryza sativa subsp. japonica GN SCAMP4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LR68|SCAM2_ARATH 21 177 + 157 none 55.48 283 66.24 3e-66 Secretory carrier-associated membrane protein 2 OS Arabidopsis thaliana GN SCAMP2 PE 2 SV 1
rpsblast_cdd gnl|CDD|190882 16 159 + 144 Gaps:7 77.40 177 43.80 4e-42 pfam04144 SCAMP SCAMP family. In vertebrates secretory carrier membrane proteins (SCAMPs) 1-3 constitute a family of putative membrane-trafficking proteins composed of cytoplasmic N-terminal sequences with NPF repeats four central transmembrane regions (TMRs) and a cytoplasmic tail. SCAMPs probably function in endocytosis by recruiting EH-domain proteins to the N-terminal NPF repeats but may have additional functions mediated by their other sequences.
rpsblast_kog gnl|CDD|38298 21 177 + 157 Gaps:4 48.88 313 45.10 2e-55 KOG3088 KOG3088 KOG3088 Secretory carrier membrane protein [Intracellular trafficking secretion and vesicular transport].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 106 124 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 40 44 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 17 159 143 PF04144 none SCAMP family IPR007273
Phobius 65 83 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 21 177 157 PTHR10687:SF15 none none none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 12 39 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 84 105 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 21 177 157 PTHR10687 none none IPR007273
Phobius 149 177 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 45 64 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 125 148 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

4 Localization

Analysis Start End Length
TMHMM 13 35 22
TMHMM 83 105 22
TMHMM 125 147 22
TMHMM 45 64 19

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 32   Secretory pathway 2 0.925 0.017 NON-PLANT 32