Protein : Qrob_P0060070.2 Q. robur
Protein Identifier  ? Qrob_P0060070.2 Organism . Name  Quercus robur
Score  70.3 Score Type  egn
Protein Description  (M=20) K09286 - EREBP-like factor Gene Prediction Quality  validated
Protein length 

Sequence

Length: 149  
Kegg Orthology  K09286
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101219005 1 147 + 147 Gaps:10 100.00 149 76.51 2e-73 ethylene-responsive transcription factor ERF011-like
blastp_kegg lcl|cmo:103493569 1 147 + 147 Gaps:12 100.00 151 75.50 6e-73 ethylene-responsive transcription factor ERF011-like
blastp_kegg lcl|vvi:100245542 1 147 + 147 Gaps:6 99.30 142 80.85 1e-72 ethylene-responsive transcription factor ERF010-like
blastp_kegg lcl|tcc:TCM_033791 1 147 + 147 Gaps:11 100.00 148 77.03 1e-69 AP2/ERF domain-containing transcription factor
blastp_kegg lcl|pop:POPTR_0014s02530g 10 147 + 138 Gaps:4 86.45 155 78.36 1e-68 dehydration responsive element binding family protein
blastp_kegg lcl|fve:101298190 10 147 + 138 Gaps:10 88.05 159 78.57 2e-68 ethylene-responsive transcription factor RAP2-1-like
blastp_kegg lcl|sly:101248770 1 148 + 148 Gaps:18 99.33 149 72.30 1e-67 ethylene-responsive transcription factor ERF010-like
blastp_kegg lcl|mdm:103455948 1 146 + 146 Gaps:15 99.38 160 71.07 4e-67 ethylene-responsive transcription factor ERF011-like
blastp_kegg lcl|sot:102589042 1 148 + 148 Gaps:14 99.31 145 74.31 1e-66 ethylene-responsive transcription factor ERF010-like
blastp_kegg lcl|mdm:103441100 1 146 + 146 Gaps:15 99.38 160 69.18 2e-66 ethylene-responsive transcription factor ERF011-like
blastp_pdb 3gcc_A 20 83 + 64 Gaps:1 92.86 70 53.85 7e-15 mol:protein length:70 ATERF1
blastp_pdb 2gcc_A 20 83 + 64 Gaps:1 92.86 70 53.85 7e-15 mol:protein length:70 ATERF1
blastp_pdb 1gcc_A 22 83 + 62 Gaps:1 100.00 63 55.56 1e-14 mol:protein length:63 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
blastp_uniprot_sprot sp|Q9SNE1|ERF11_ARATH 17 147 + 131 Gaps:11 88.89 153 61.03 8e-51 Ethylene-responsive transcription factor ERF011 OS Arabidopsis thaliana GN ERF011 PE 2 SV 1
blastp_uniprot_sprot sp|O22174|ERF08_ARATH 17 148 + 132 Gaps:17 84.66 176 58.39 1e-50 Ethylene-responsive transcription factor ERF008 OS Arabidopsis thaliana GN ERF008 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LC30|RAP21_ARATH 1 139 + 139 Gaps:23 96.73 153 64.86 2e-50 Ethylene-responsive transcription factor RAP2-1 OS Arabidopsis thaliana GN RAP2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH94|ERF10_ARATH 18 118 + 101 Gaps:1 54.35 184 77.00 1e-48 Ethylene-responsive transcription factor ERF010 OS Arabidopsis thaliana GN ERF010 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SW63|RA210_ARATH 18 147 + 130 Gaps:43 88.27 196 51.45 7e-47 Ethylene-responsive transcription factor RAP2-10 OS Arabidopsis thaliana GN RAP2-10 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W3M3|RAP29_ARATH 7 139 + 133 Gaps:12 84.67 150 65.35 3e-46 Ethylene-responsive transcription factor RAP2-9 OS Arabidopsis thaliana GN RAP2-9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUK8|ERF39_ARATH 9 85 + 77 Gaps:1 43.58 179 56.41 1e-25 Ethylene-responsive transcription factor ERF039 OS Arabidopsis thaliana GN ERF039 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C9I2|ERF21_ARATH 1 82 + 82 none 44.81 183 53.66 6e-24 Ethylene-responsive transcription factor ERF021 OS Arabidopsis thaliana GN ERF021 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZQP3|ERF38_ARATH 24 85 + 62 none 31.96 194 62.90 2e-23 Ethylene-responsive transcription factor ERF038 OS Arabidopsis thaliana GN ERF038 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYD3|DREB3_ARATH 9 82 + 74 Gaps:1 31.78 236 57.33 2e-23 Dehydration-responsive element-binding protein 3 OS Arabidopsis thaliana GN DREB3 PE 2 SV 1
rpsblast_cdd gnl|CDD|197689 24 86 + 63 none 98.44 64 60.32 2e-24 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 24 82 + 59 none 96.72 61 62.71 4e-18 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 24 72 + 49 Gaps:4 96.23 53 50.98 8e-08 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 24 35 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 62 82 21 PR00367 none Ethylene responsive element binding protein signature IPR001471
SUPERFAMILY 23 81 59 SSF54171 none none IPR016177
PANTHER 19 148 130 PTHR31729 none none none
PANTHER 19 148 130 PTHR31729:SF0 none none none
SMART 23 86 64 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
Gene3D 24 81 58 G3DSA:3.30.730.10 none none IPR001471
ProSiteProfiles 23 80 58 PS51032 none AP2/ERF domain profile. IPR001471
Pfam 23 72 50 PF00847 none AP2 domain IPR001471

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting