Protein : Qrob_P0058930.2 Q. robur
Protein Identifier  ? Qrob_P0058930.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=105) PF00139 - Legume lectin domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 169  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0030246 carbohydrate binding Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_007342 11 167 + 157 Gaps:3 22.60 708 51.25 2e-42 Concanavalin A-like lectin protein kinase family protein putative
blastp_kegg lcl|gmx:102662553 21 167 + 147 none 51.76 284 48.98 7e-42 agglutinin-2-like
blastp_kegg lcl|pop:POPTR_0001s29090g 13 167 + 155 Gaps:5 21.08 721 51.97 3e-39 POPTRDRAFT_798114 hypothetical protein
blastp_kegg lcl|vvi:100259008 14 167 + 154 Gaps:6 20.83 720 52.67 5e-39 L-type lectin-domain containing receptor kinase IX.1-like
blastp_kegg lcl|gmx:100817743 10 167 + 158 Gaps:1 22.49 707 44.65 5e-38 L-type lectin-domain containing receptor kinase IX.1-like
blastp_kegg lcl|cam:101491058 15 167 + 153 Gaps:14 20.30 1384 43.06 6e-37 uncharacterized LOC101491058
blastp_kegg lcl|pop:POPTR_0001s29000g 15 167 + 153 Gaps:2 22.60 677 49.67 3e-35 POPTRDRAFT_549459 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10030065mg 23 167 + 145 Gaps:9 48.40 281 52.21 6e-35 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s29080g 13 167 + 155 Gaps:7 22.25 683 51.32 2e-34 Chain H family protein
blastp_kegg lcl|sot:102589852 22 166 + 145 Gaps:4 20.28 715 49.66 2e-34 L-type lectin-domain containing receptor kinase IX.1-like
blastp_pdb 1lgc_E 41 166 + 126 Gaps:9 64.64 181 41.03 2e-17 mol:protein length:181 LEGUME ISOLECTIN II (ALPHA CHAIN)
blastp_pdb 1lgc_C 41 166 + 126 Gaps:9 64.64 181 41.03 2e-17 mol:protein length:181 LEGUME ISOLECTIN II (ALPHA CHAIN)
blastp_pdb 1lgc_A 41 166 + 126 Gaps:9 64.64 181 41.03 2e-17 mol:protein length:181 LEGUME ISOLECTIN II (ALPHA CHAIN)
blastp_pdb 1lgb_A 41 166 + 126 Gaps:9 64.64 181 41.03 2e-17 mol:protein length:181 LEGUME ISOLECTIN II (ALPHA CHAIN)
blastp_pdb 1v6o_H 40 166 + 127 Gaps:13 51.72 232 40.00 3e-17 mol:protein length:232 Galactose-binding lectin
blastp_pdb 1v6o_G 40 166 + 127 Gaps:13 51.72 232 40.00 3e-17 mol:protein length:232 Galactose-binding lectin
blastp_pdb 1v6o_F 40 166 + 127 Gaps:13 51.72 232 40.00 3e-17 mol:protein length:232 Galactose-binding lectin
blastp_pdb 1v6o_E 40 166 + 127 Gaps:13 51.72 232 40.00 3e-17 mol:protein length:232 Galactose-binding lectin
blastp_pdb 1v6o_D 40 166 + 127 Gaps:13 51.72 232 40.00 3e-17 mol:protein length:232 Galactose-binding lectin
blastp_pdb 1v6o_C 40 166 + 127 Gaps:13 51.72 232 40.00 3e-17 mol:protein length:232 Galactose-binding lectin
blastp_uniprot_sprot sp|Q41162|LCS1_ROBPS 20 166 + 147 Gaps:8 51.58 285 38.10 4e-19 Seed agglutinin 1 OS Robinia pseudoacacia PE 1 SV 1
blastp_uniprot_sprot sp|Q39527|LECR_CLAKE 10 166 + 157 Gaps:11 53.79 290 36.54 6e-19 Lectin-related protein (Fragment) OS Cladrastis kentukea PE 1 SV 1
blastp_uniprot_sprot sp|Q41159|LCB1_ROBPS 1 166 + 166 Gaps:10 55.44 285 37.34 2e-18 Bark agglutinin I polypeptide A OS Robinia pseudoacacia PE 1 SV 1
blastp_uniprot_sprot sp|Q41161|LCS2_ROBPS 20 166 + 147 Gaps:8 51.58 285 37.41 3e-18 Seed agglutinin 2 OS Robinia pseudoacacia PE 1 SV 1
blastp_uniprot_sprot sp|Q42372|LCB2_ROBPS 20 166 + 147 Gaps:7 51.75 286 37.16 7e-18 Bark agglutinin I polypeptide B OS Robinia pseudoacacia PE 1 SV 1
blastp_uniprot_sprot sp|P02872|LECG_ARAHY 16 166 + 151 Gaps:16 51.65 273 36.88 1e-17 Galactose-binding lectin OS Arachis hypogaea PE 1 SV 3
blastp_uniprot_sprot sp|P93535|LECS_STYJP 1 166 + 166 Gaps:11 56.51 292 34.55 2e-17 Seed lectin OS Styphnolobium japonicum PE 2 SV 1
blastp_uniprot_sprot sp|Q39529|LEC2_CLAKE 18 166 + 149 Gaps:4 52.07 290 33.11 4e-17 Agglutinin-2 OS Cladrastis kentukea PE 1 SV 1
blastp_uniprot_sprot sp|P93538|LECB_STYJP 26 166 + 141 Gaps:10 52.22 270 36.17 4e-17 Bark lectin (Fragment) OS Styphnolobium japonicum PE 2 SV 1
blastp_uniprot_sprot sp|Q93WH6|LEC_LENCC 17 166 + 150 Gaps:10 50.91 275 36.43 1e-16 Lectin OS Lens culinaris subsp. culinaris PE 3 SV 2

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 39 167 129 SSF49899 none none IPR013320
Gene3D 38 167 130 G3DSA:2.60.120.200 none none IPR013320
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 30 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 39 168 130 PF00139 none Legume lectin domain IPR001220
Phobius 31 168 138 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 15 34 19

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 39   Secretory pathway 3 0.771 0.042 NON-PLANT 39