Protein : Qrob_P0053880.2 Q. robur
Protein Identifier  ? Qrob_P0053880.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=108) PF00847 - AP2 domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 226  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_003G292400g 19 209 + 191 Gaps:25 86.34 227 43.88 3e-36 hypothetical protein
blastp_kegg lcl|fve:101295697 19 205 + 187 Gaps:30 82.08 240 48.73 7e-36 ethylene-responsive transcription factor ERF109-like
blastp_kegg lcl|pxb:103964489 19 171 + 153 Gaps:35 67.42 264 47.75 7e-36 ethylene-responsive transcription factor SHINE 2-like
blastp_kegg lcl|pmum:103339923 22 208 + 187 Gaps:70 82.77 267 42.53 8e-36 ethylene-responsive transcription factor ERF109-like
blastp_kegg lcl|mdm:103402995 19 147 + 129 Gaps:55 93.62 188 46.59 4e-35 ethylene-responsive transcription factor ERF109-like
blastp_kegg lcl|pxb:103955516 19 145 + 127 Gaps:43 61.89 265 47.56 5e-35 ethylene-responsive transcription factor ERF109-like
blastp_kegg lcl|pxb:103955515 19 145 + 127 Gaps:43 61.89 265 47.56 5e-35 ethylene-responsive transcription factor ERF109-like
blastp_kegg lcl|pxb:103955514 19 145 + 127 Gaps:43 61.89 265 47.56 5e-35 ethylene-responsive transcription factor ERF109-like
blastp_kegg lcl|fve:101292641 19 200 + 182 Gaps:42 89.29 224 42.00 9e-35 ethylene-responsive transcription factor ERF109-like
blastp_kegg lcl|pper:PRUPE_ppa017002mg 19 212 + 194 Gaps:71 95.86 266 37.65 1e-33 hypothetical protein
blastp_pdb 1gcc_A 84 143 + 60 Gaps:1 96.83 63 68.85 3e-22 mol:protein length:63 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
blastp_pdb 3gcc_A 84 143 + 60 Gaps:1 87.14 70 68.85 1e-21 mol:protein length:70 ATERF1
blastp_pdb 2gcc_A 84 143 + 60 Gaps:1 87.14 70 68.85 1e-21 mol:protein length:70 ATERF1
blastp_uniprot_sprot sp|P93007|EF112_ARATH 51 142 + 92 Gaps:8 39.45 218 65.12 4e-27 Ethylene-responsive transcription factor ERF112 OS Arabidopsis thaliana GN ERF112 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYU3|EF113_ARATH 84 142 + 59 none 27.83 212 76.27 1e-25 Ethylene-responsive transcription factor ERF113 OS Arabidopsis thaliana GN ERF113 PE 2 SV 1
blastp_uniprot_sprot sp|O22259|ERF71_ARATH 64 142 + 79 Gaps:4 48.54 171 60.24 2e-25 Ethylene-responsive transcription factor ERF071 OS Arabidopsis thaliana GN ERF071 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH54|EF114_ARATH 84 142 + 59 none 23.79 248 74.58 5e-25 Ethylene-responsive transcription factor ERF114 OS Arabidopsis thaliana GN ERF114 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUE3|CRF4_ARATH 82 180 + 99 Gaps:9 27.46 335 59.78 2e-24 Ethylene-responsive transcription factor CRF4 OS Arabidopsis thaliana GN CRF4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9ZWA2|ERF77_ARATH 83 146 + 64 none 26.12 245 67.19 2e-24 Ethylene-responsive transcription factor 10 OS Arabidopsis thaliana GN ERF10 PE 2 SV 1
blastp_uniprot_sprot sp|Q8H0T5|ERF73_ARATH 62 168 + 107 Gaps:5 49.29 211 49.04 2e-24 Ethylene-responsive transcription factor ERF073 OS Arabidopsis thaliana GN ERF073 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FK12|CRF3_ARATH 66 141 + 76 none 21.47 354 57.89 3e-23 Ethylene-responsive transcription factor CRF3 OS Arabidopsis thaliana GN CRF3 PE 1 SV 1
blastp_uniprot_sprot sp|P42736|RAP23_ARATH 73 142 + 70 Gaps:4 26.61 248 69.70 5e-23 Ethylene-responsive transcription factor RAP2-3 OS Arabidopsis thaliana GN RAP2-3 PE 1 SV 2
blastp_uniprot_sprot sp|O82503|CRF1_ARATH 84 142 + 59 none 20.56 287 71.19 5e-23 Ethylene-responsive transcription factor CRF1 OS Arabidopsis thaliana GN CRF1 PE 1 SV 1
rpsblast_cdd gnl|CDD|197689 85 148 + 64 none 100.00 64 73.44 1e-28 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 84 144 + 61 none 100.00 61 72.13 1e-23 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 84 134 + 51 Gaps:4 100.00 53 56.60 8e-12 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 85 144 60 SSF54171 none none IPR016177
Gene3D 85 142 58 G3DSA:3.30.730.10 none none IPR001471
PANTHER 58 195 138 PTHR31677 none none none
PANTHER 58 195 138 PTHR31677:SF0 none none none
SMART 85 148 64 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
Pfam 85 134 50 PF00847 none AP2 domain IPR001471
ProSiteProfiles 85 142 58 PS51032 none AP2/ERF domain profile. IPR001471
PRINTS 86 97 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 108 124 17 PR00367 none Ethylene responsive element binding protein signature IPR001471

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5

0 Targeting