Protein : Qrob_P0053200.2 Q. robur
Protein Identifier  ? Qrob_P0053200.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) 4.2.3.48 - (3S,6E)-nerolidol synthase. Code Enzyme  EC:4.2.3.48
Gene Prediction Quality  validated Protein length 

Sequence

Length: 142  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0010333 terpene synthase activity Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100244535 2 103 + 102 Gaps:2 17.18 582 58.00 2e-28 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|vvi:100852561 2 103 + 102 Gaps:2 17.12 584 58.00 2e-28 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|vvi:100852812 2 103 + 102 Gaps:2 18.42 543 58.00 2e-28 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|vvi:100853562 2 103 + 102 Gaps:2 17.15 583 57.00 6e-28 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|vvi:100852527 2 99 + 98 Gaps:2 16.44 584 59.38 8e-28 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|vvi:100854680 2 103 + 102 Gaps:2 17.12 584 56.00 8e-27 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|vvi:100267150 10 103 + 94 Gaps:2 15.31 601 59.78 5e-26 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|vvi:100266449 10 103 + 94 Gaps:2 15.03 612 58.70 8e-26 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|cit:102617431 14 102 + 89 Gaps:3 15.02 586 62.50 2e-24 (3S 6E)-nerolidol synthase 1 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0011s03490g 20 112 + 93 Gaps:5 19.82 444 60.23 2e-24 hypothetical protein
blastp_pdb 3g4f_B 19 103 + 85 Gaps:5 14.44 554 40.00 6e-10 mol:protein length:554 (+)-delta-cadinene synthase isozyme XC1
blastp_pdb 3g4f_A 19 103 + 85 Gaps:5 14.44 554 40.00 6e-10 mol:protein length:554 (+)-delta-cadinene synthase isozyme XC1
blastp_pdb 3g4d_B 19 103 + 85 Gaps:5 14.44 554 40.00 6e-10 mol:protein length:554 (+)-delta-cadinene synthase isozyme XC1
blastp_pdb 3g4d_A 19 103 + 85 Gaps:5 14.44 554 40.00 6e-10 mol:protein length:554 (+)-delta-cadinene synthase isozyme XC1
blastp_pdb 5eat_A 17 102 + 86 Gaps:7 14.78 548 41.98 3e-09 mol:protein length:548 5-EPI-ARISTOLOCHENE SYNTHASE
blastp_pdb 5eas_A 17 102 + 86 Gaps:7 14.78 548 41.98 3e-09 mol:protein length:548 5-EPI-ARISTOLOCHENE SYNTHASE
blastp_pdb 3m00_A 17 102 + 86 Gaps:7 14.73 550 40.74 6e-09 mol:protein length:550 Aristolochene synthase
blastp_pdb 3lz9_A 17 102 + 86 Gaps:7 14.73 550 40.74 6e-09 mol:protein length:550 Aristolochene synthase
blastp_pdb 5eau_A 17 102 + 86 Gaps:7 14.78 548 40.74 6e-09 mol:protein length:548 5-EPI-ARISTOLOCHENE SYNTHASE
blastp_pdb 3m02_A 17 102 + 86 Gaps:7 14.73 550 40.74 6e-09 mol:protein length:550 Aristolochene synthase
blastp_uniprot_sprot sp|P0CV96|NES1_FRAVE 16 101 + 86 Gaps:7 13.97 580 62.96 6e-21 (3S 6E)-nerolidol synthase 1 chloroplastic OS Fragaria vesca PE 1 SV 1
blastp_uniprot_sprot sp|P0CV94|NES1_FRAAN 16 101 + 86 Gaps:7 15.61 519 60.49 2e-19 (3S 6E)-nerolidol synthase 1 OS Fragaria ananassa PE 1 SV 1
blastp_uniprot_sprot sp|P0CV95|NES2_FRAAN 16 101 + 86 Gaps:7 14.01 578 58.02 2e-18 (3S 6E)-nerolidol synthase 2 chloroplastic/mitochondrial OS Fragaria ananassa PE 1 SV 1
blastp_uniprot_sprot sp|B9RXW4|TPS13_RICCO 22 103 + 82 Gaps:4 13.64 572 58.97 3e-18 Probable terpene synthase 13 OS Ricinus communis GN TPS13 PE 3 SV 1
blastp_uniprot_sprot sp|B9RHX7|TPS4_RICCO 19 105 + 87 Gaps:5 14.92 563 50.00 3e-16 Probable terpene synthase 4 OS Ricinus communis GN TPS4 PE 3 SV 1
blastp_uniprot_sprot sp|Q6Q3H3|TPSGD_VITVI 19 102 + 84 Gaps:5 14.54 557 48.15 2e-13 (-)-germacrene D synthase OS Vitis vinifera GN VIT_19s0014g04930 PE 1 SV 1
blastp_uniprot_sprot sp|Q49SP4|TPGD1_POGCB 19 103 + 85 Gaps:3 15.41 545 50.00 2e-13 Germacrene D synthase 1 OS Pogostemon cablin PE 1 SV 1
blastp_uniprot_sprot sp|B9RPM3|TPS9_RICCO 14 102 + 89 Gaps:9 14.04 584 47.56 8e-13 Probable terpene synthase 9 OS Ricinus communis GN TPS9 PE 3 SV 1
blastp_uniprot_sprot sp|Q84UV0|LINS_ARATH 20 124 + 105 Gaps:16 16.70 569 47.37 8e-13 S-(+)-linalool synthase chloroplastic OS Arabidopsis thaliana GN TPS14 PE 2 SV 2
blastp_uniprot_sprot sp|B2KSJ6|AFSY1_CUCME 14 105 + 92 Gaps:3 16.61 560 43.01 2e-12 Alpha-farnesene synthase OS Cucumis melo PE 1 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 21 103 83 PTHR31225 none none none
PANTHER 21 103 83 PTHR31225:SF1 none none none
Gene3D 18 103 86 G3DSA:1.50.30.10 none none IPR001906
Pfam 13 103 91 PF01397 none Terpene synthase, N-terminal domain IPR001906
SUPERFAMILY 12 103 92 SSF48239 none none IPR008930

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5

0 Targeting