Protein : Qrob_P0052690.2 Q. robur
Protein Identifier  ? Qrob_P0052690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K02115 - F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Code Enzyme  EC:3.6.3.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 373  
Kegg Orthology  K02115
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0046961 proton-transporting ATPase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO:0015986 ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_030229 1 368 + 368 Gaps:1 97.87 375 78.47 0.0 ATPase F1 complex gamma subunit protein
blastp_kegg lcl|gmx:100037480 1 369 + 369 Gaps:1 98.13 375 77.72 0.0 ATPC chloroplastic ATP synthase gamma subunit
blastp_kegg lcl|rcu:RCOM_1256440 1 372 + 372 Gaps:2 98.16 381 76.74 0.0 ATP synthase gamma chain 2 chloroplast putative (EC:3.6.3.14)
blastp_kegg lcl|gmx:100797290 1 369 + 369 Gaps:1 98.13 375 77.45 0.0 ATP synthase gamma chain chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa026676mg 1 372 + 372 Gaps:6 98.12 373 78.96 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0904560 1 368 + 368 none 97.87 376 77.17 0.0 ATP synthase gamma chain 2 chloroplast putative (EC:3.6.3.14)
blastp_kegg lcl|mdm:103438301 1 372 + 372 Gaps:9 98.11 370 79.89 0.0 ATP synthase gamma chain chloroplastic-like
blastp_kegg lcl|pxb:103948177 1 368 + 368 Gaps:2 97.86 374 76.23 0.0 ATP synthase gamma chain chloroplastic
blastp_kegg lcl|cit:102629991 1 368 + 368 Gaps:1 99.73 368 77.11 0.0 ATP synthase gamma chain chloroplastic-like
blastp_kegg lcl|pxb:103946845 1 372 + 372 Gaps:9 98.11 370 79.34 0.0 ATP synthase gamma chain chloroplastic-like
blastp_pdb 2qe7_G 48 369 + 322 Gaps:40 99.30 286 44.37 1e-63 mol:protein length:286 ATP synthase subunit gamma
blastp_pdb 3oaa_e 47 368 + 322 Gaps:36 100.00 286 37.06 2e-45 mol:protein length:286 ATP synthase gamma chain
blastp_pdb 3oaa_W 47 368 + 322 Gaps:36 100.00 286 37.06 2e-45 mol:protein length:286 ATP synthase gamma chain
blastp_pdb 3oaa_O 47 368 + 322 Gaps:36 100.00 286 37.06 2e-45 mol:protein length:286 ATP synthase gamma chain
blastp_pdb 3oaa_G 47 368 + 322 Gaps:36 100.00 286 37.06 2e-45 mol:protein length:286 ATP synthase gamma chain
blastp_pdb 2xok_G 44 368 + 325 Gaps:61 90.03 311 33.21 5e-27 mol:protein length:311 ATP SYNTHASE SUBUNIT GAMMA MITOCHONDRIAL
blastp_pdb 3zry_G 49 368 + 320 Gaps:61 98.92 278 33.45 4e-26 mol:protein length:278 ATP SYNTHASE SUBUNIT GAMMA MITOCHONDRIAL
blastp_pdb 3ofn_Y 49 368 + 320 Gaps:61 98.92 278 33.45 4e-26 mol:protein length:278 ATP synthase subunit gamma
blastp_pdb 3ofn_P 49 368 + 320 Gaps:61 98.92 278 33.45 4e-26 mol:protein length:278 ATP synthase subunit gamma
blastp_pdb 3ofn_G 49 368 + 320 Gaps:61 98.92 278 33.45 4e-26 mol:protein length:278 ATP synthase subunit gamma
blastp_uniprot_sprot sp|P29790|ATPG_TOBAC 1 368 + 368 Gaps:1 97.88 377 74.53 0.0 ATP synthase gamma chain chloroplastic OS Nicotiana tabacum GN ATPC PE 1 SV 1
blastp_uniprot_sprot sp|P28552|ATPG_PEA 1 364 + 364 Gaps:2 96.28 376 73.76 0.0 ATP synthase gamma chain chloroplastic OS Pisum sativum GN ATPC PE 1 SV 1
blastp_uniprot_sprot sp|P05435|ATPG_SPIOL 33 367 + 335 Gaps:15 96.15 364 73.43 0.0 ATP synthase gamma chain chloroplastic OS Spinacia oleracea GN ATPC PE 1 SV 2
blastp_uniprot_sprot sp|Q01908|ATPG1_ARATH 1 367 + 367 Gaps:6 97.32 373 73.83 0.0 ATP synthase gamma chain 1 chloroplastic OS Arabidopsis thaliana GN ATPC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q01909|ATPG2_ARATH 23 370 + 348 Gaps:3 89.90 386 75.22 0.0 ATP synthase gamma chain 2 chloroplastic OS Arabidopsis thaliana GN ATPC2 PE 2 SV 1
blastp_uniprot_sprot sp|P0C1M0|ATPG_MAIZE 45 368 + 324 none 90.25 359 74.07 2e-177 ATP synthase subunit gamma chloroplastic OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P12113|ATPG_CHLRE 39 367 + 329 none 91.90 358 58.36 1e-141 ATP synthase gamma chain chloroplastic OS Chlamydomonas reinhardtii GN ATPC PE 1 SV 1
blastp_uniprot_sprot sp|Q3M9W1|ATPG_ANAVT 49 368 + 320 Gaps:11 98.73 315 58.84 8e-123 ATP synthase gamma chain OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN atpG PE 3 SV 1
blastp_uniprot_sprot sp|P12408|ATPG_NOSS1 49 368 + 320 Gaps:11 98.73 315 58.52 2e-122 ATP synthase gamma chain OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN atpG PE 3 SV 2
blastp_uniprot_sprot sp|B8HPK2|ATPG_CYAP4 47 369 + 323 Gaps:11 99.68 315 57.64 7e-122 ATP synthase gamma chain OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN atpG PE 3 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 49 368 320 PF00231 none ATP synthase IPR000131
PANTHER 11 370 360 PTHR11693 none none IPR000131
PANTHER 11 370 360 PTHR11693:SF21 none none none
Gene3D 112 239 128 G3DSA:3.40.1380.10 none none none
Gene3D 317 363 47 G3DSA:1.10.287.80 none none none
Gene3D 283 316 34 G3DSA:1.10.287.80 none none none
Gene3D 64 105 42 G3DSA:1.10.287.80 none none none
SUPERFAMILY 285 368 84 SSF52943 none none IPR023633
SUPERFAMILY 48 245 198 SSF52943 none none IPR023633
PRINTS 120 139 20 PR00126 none ATP synthase gamma subunit signature IPR000131
PRINTS 315 334 20 PR00126 none ATP synthase gamma subunit signature IPR000131
PRINTS 346 367 22 PR00126 none ATP synthase gamma subunit signature IPR000131
PRINTS 213 230 18 PR00126 none ATP synthase gamma subunit signature IPR000131
TIGRFAM 48 368 321 TIGR01146 none ATPsyn_F1gamma: ATP synthase F1, gamma subunit IPR000131
ProSitePatterns 354 367 14 PS00153 none ATP synthase gamma subunit signature. IPR023632

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting