Protein : Qrob_P0052540.2 Q. robur
Protein Identifier  ? Qrob_P0052540.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 3.5.2.3 - Dihydroorotase. Code Enzyme  EC:3.5.2.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 387  
Kegg Orthology  K01465
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016787 hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide.
GO:0004151 dihydroorotase activity Catalysis of the reaction: (S)-dihydroorotate + H(2)O = N-carbamoyl-L-aspartate + H(+).
GO:0019856 pyrimidine nucleobase biosynthetic process The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103328382 1 385 + 385 Gaps:9 99.73 377 84.84 0.0 dihydroorotase mitochondrial
blastp_kegg lcl|vvi:100245511 1 384 + 384 Gaps:9 99.47 377 83.73 0.0 dihydroorotase mitochondrial-like
blastp_kegg lcl|mdm:103411857 1 384 + 384 Gaps:9 99.47 377 83.20 0.0 dihydroorotase mitochondrial-like
blastp_kegg lcl|rcu:RCOM_1173930 4 384 + 381 Gaps:12 94.22 398 82.13 0.0 Dihydroorotase mitochondrial precursor putative (EC:3.5.2.3)
blastp_kegg lcl|csv:101214458 1 385 + 385 Gaps:9 99.73 377 81.12 0.0 dihydroorotase mitochondrial-like
blastp_kegg lcl|cmo:103486989 1 385 + 385 Gaps:9 99.21 379 80.59 0.0 dihydroorotase mitochondrial
blastp_kegg lcl|cit:102627324 32 386 + 355 Gaps:9 100.00 346 86.71 0.0 dihydroorotase mitochondrial-like
blastp_kegg lcl|pop:POPTR_0007s00940g 32 384 + 353 Gaps:9 99.42 346 86.63 0.0 POPTRDRAFT_763726 hypothetical protein
blastp_kegg lcl|fve:101307131 32 385 + 354 Gaps:9 99.71 346 86.96 0.0 dihydroorotase mitochondrial-like
blastp_kegg lcl|brp:103861347 1 385 + 385 Gaps:15 99.74 379 79.63 0.0 dihydroorotase mitochondrial
blastp_pdb 2eg8_B 29 381 + 353 Gaps:11 98.56 347 56.73 1e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 2eg8_A 29 381 + 353 Gaps:11 98.56 347 56.73 1e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 2eg7_B 29 381 + 353 Gaps:11 98.56 347 56.73 1e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 2eg7_A 29 381 + 353 Gaps:11 98.56 347 56.73 1e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 2eg6_B 29 381 + 353 Gaps:11 98.56 347 56.73 1e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 2eg6_A 29 381 + 353 Gaps:11 98.56 347 56.73 1e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 1xge_B 29 381 + 353 Gaps:11 98.56 347 56.73 1e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 1xge_A 29 381 + 353 Gaps:11 98.56 347 56.73 1e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 3mjm_B 29 381 + 353 Gaps:11 98.56 347 56.73 2e-134 mol:protein length:347 Dihydroorotase
blastp_pdb 3mjm_A 29 381 + 353 Gaps:11 98.56 347 56.73 2e-134 mol:protein length:347 Dihydroorotase
blastp_uniprot_sprot sp|O04904|PYRC_ARATH 1 383 + 383 Gaps:10 99.47 377 77.60 0.0 Dihydroorotase mitochondrial OS Arabidopsis thaliana GN PYR4 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JJD1|PYRC_ORYSJ 30 384 + 355 Gaps:9 85.22 406 81.21 0.0 Dihydroorotase mitochondrial OS Oryza sativa subsp. japonica GN PYRC PE 2 SV 1
blastp_uniprot_sprot sp|C1D672|PYRC_LARHH 34 382 + 349 Gaps:12 98.26 345 65.49 2e-150 Dihydroorotase OS Laribacter hongkongensis (strain HLHK9) GN pyrC PE 3 SV 1
blastp_uniprot_sprot sp|B1XI96|PYRC_SYNP2 33 382 + 350 Gaps:11 97.98 346 62.54 2e-150 Dihydroorotase OS Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN pyrC PE 3 SV 1
blastp_uniprot_sprot sp|Q82WF3|PYRC_NITEU 33 382 + 350 Gaps:13 97.71 349 61.00 2e-148 Dihydroorotase OS Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN pyrC PE 3 SV 1
blastp_uniprot_sprot sp|B0CF78|PYRC_ACAM1 33 382 + 350 Gaps:11 98.26 345 61.65 2e-147 Dihydroorotase OS Acaryochloris marina (strain MBIC 11017) GN pyrC PE 3 SV 1
blastp_uniprot_sprot sp|B2AH54|PYRC_CUPTR 33 382 + 350 Gaps:11 98.55 344 61.36 5e-146 Dihydroorotase OS Cupriavidus taiwanensis (strain R1 / LMG 19424) GN pyrC PE 3 SV 1
blastp_uniprot_sprot sp|Q1LRD4|PYRC_RALME 33 384 + 352 Gaps:11 99.13 344 61.00 4e-145 Dihydroorotase OS Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN pyrC PE 3 SV 1
blastp_uniprot_sprot sp|B2UFJ8|PYRC_RALPJ 34 382 + 349 Gaps:11 98.26 344 62.13 6e-145 Dihydroorotase OS Ralstonia pickettii (strain 12J) GN pyrC PE 3 SV 1
blastp_uniprot_sprot sp|Q8Y249|PYRC_RALSO 34 382 + 349 Gaps:11 98.26 344 61.83 7e-145 Dihydroorotase OS Ralstonia solanacearum (strain GMI1000) GN pyrC PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 41 49 9 PS00482 "KEGG:00240+3.5.2.3","MetaCyc:PWY-5686","UniPathway:UPA00070" Dihydroorotase signature 1. IPR002195
ProSitePatterns 286 297 12 PS00483 "KEGG:00240+3.5.2.3","MetaCyc:PWY-5686","UniPathway:UPA00070" Dihydroorotase signature 2. IPR002195
PANTHER 31 350 320 PTHR11647:SF59 "KEGG:00240+3.5.2.3","MetaCyc:PWY-5686","UniPathway:UPA00070";signature_desc=DIHYDROOROTASE (PTHR11647:SF59) none IPR004721
TIGRFAM 33 382 350 TIGR00856 "KEGG:00240+3.5.2.3","MetaCyc:PWY-5686","UniPathway:UPA00070" pyrC_dimer: dihydroorotase, homodimeric type IPR004721
PANTHER 31 350 320 PTHR11647 none none none
SUPERFAMILY 33 382 350 SSF51556 none none none
Gene3D 33 382 350 G3DSA:3.20.20.140 none none none
Pfam 41 381 341 PF01979 none Amidohydrolase family IPR006680
Hamap 32 384 353 MF_00219 "KEGG:00240+3.5.2.3","MetaCyc:PWY-5686","UniPathway:UPA00070" Dihydroorotase [pyrC]. IPR004721
PIRSF 30 385 356 PIRSF001237 "KEGG:00240+3.5.2.3","MetaCyc:PWY-5686","UniPathway:UPA00070" none IPR004721

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting