3 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005524 | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
GO:0004594 | pantothenate kinase activity | Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate. |
GO:0015937 | coenzyme A biosynthetic process | The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester. |
40 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pper:PRUPE_ppa001094mg | 1 | 912 | + | 912 | Gaps:8 | 100.00 | 910 | 90.88 | 0.0 | hypothetical protein |
blastp_kegg | lcl|pmum:103338350 | 1 | 912 | + | 912 | Gaps:4 | 100.00 | 910 | 90.33 | 0.0 | pantothenate kinase 2 |
blastp_kegg | lcl|mdm:103420318 | 1 | 912 | + | 912 | Gaps:10 | 100.00 | 916 | 89.30 | 0.0 | pantothenate kinase 2-like |
blastp_kegg | lcl|vvi:100255260 | 1 | 911 | + | 911 | Gaps:10 | 99.89 | 906 | 90.28 | 0.0 | pantothenate kinase 2-like |
blastp_kegg | lcl|fve:101302263 | 1 | 912 | + | 912 | Gaps:6 | 100.00 | 908 | 89.21 | 0.0 | pantothenate kinase 2-like |
blastp_kegg | lcl|rcu:RCOM_1510490 | 1 | 912 | + | 912 | Gaps:9 | 100.00 | 907 | 90.52 | 0.0 | Pantothenate kinase putative (EC:2.7.1.33) |
blastp_kegg | lcl|pop:POPTR_0012s08310g | 1 | 912 | + | 912 | Gaps:27 | 100.00 | 939 | 87.11 | 0.0 | POPTRDRAFT_570098 hypothetical protein |
blastp_kegg | lcl|pxb:103953015 | 15 | 912 | + | 898 | Gaps:15 | 99.13 | 915 | 88.53 | 0.0 | pantothenate kinase 2 |
blastp_kegg | lcl|tcc:TCM_012079 | 2 | 912 | + | 911 | Gaps:50 | 96.92 | 973 | 86.96 | 0.0 | Pantothenate kinase 2 isoform 1 |
blastp_kegg | lcl|mdm:103455216 | 11 | 912 | + | 902 | Gaps:6 | 99.23 | 907 | 88.22 | 0.0 | pantothenate kinase 2 |
blastp_pdb | 2q40_A | 542 | 908 | + | 367 | Gaps:42 | 89.65 | 367 | 41.03 | 6e-64 | mol:protein length:367 Protein At2g17340 |
blastp_pdb | 1xfi_A | 542 | 908 | + | 367 | Gaps:42 | 89.65 | 367 | 41.03 | 6e-64 | mol:protein length:367 unknown protein |
blastp_pdb | 2i7n_B | 89 | 431 | + | 343 | Gaps:42 | 97.50 | 360 | 36.18 | 4e-55 | mol:protein length:360 Pantothenate kinase 1 |
blastp_pdb | 2i7n_A | 89 | 431 | + | 343 | Gaps:42 | 97.50 | 360 | 36.18 | 4e-55 | mol:protein length:360 Pantothenate kinase 1 |
blastp_pdb | 3smp_B | 89 | 435 | + | 347 | Gaps:42 | 91.97 | 386 | 36.06 | 9e-55 | mol:protein length:386 Pantothenate kinase 1 |
blastp_pdb | 3smp_A | 89 | 435 | + | 347 | Gaps:42 | 91.97 | 386 | 36.06 | 9e-55 | mol:protein length:386 Pantothenate kinase 1 |
blastp_pdb | 2i7p_D | 89 | 431 | + | 343 | Gaps:48 | 96.96 | 362 | 37.04 | 1e-53 | mol:protein length:362 Pantothenate kinase 3 |
blastp_pdb | 2i7p_C | 89 | 431 | + | 343 | Gaps:48 | 96.96 | 362 | 37.04 | 1e-53 | mol:protein length:362 Pantothenate kinase 3 |
blastp_pdb | 2i7p_B | 89 | 431 | + | 343 | Gaps:48 | 96.96 | 362 | 37.04 | 1e-53 | mol:protein length:362 Pantothenate kinase 3 |
blastp_pdb | 2i7p_A | 89 | 431 | + | 343 | Gaps:48 | 96.96 | 362 | 37.04 | 1e-53 | mol:protein length:362 Pantothenate kinase 3 |
blastp_uniprot_sprot | sp|Q8L5Y9|PANK2_ARATH | 18 | 912 | + | 895 | Gaps:10 | 99.56 | 901 | 84.84 | 0.0 | Pantothenate kinase 2 OS Arabidopsis thaliana GN At4g32180 PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q4R4U1|PANK4_MACFA | 84 | 909 | + | 826 | Gaps:108 | 95.47 | 773 | 45.12 | 0.0 | Pantothenate kinase 4 OS Macaca fascicularis GN PANK4 PE 2 SV 2 |
blastp_uniprot_sprot | sp|Q5R5F8|PANK4_PONAB | 84 | 909 | + | 826 | Gaps:108 | 95.47 | 773 | 44.85 | 0.0 | Pantothenate kinase 4 OS Pongo abelii GN PANK4 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9NVE7|PANK4_HUMAN | 84 | 909 | + | 826 | Gaps:108 | 95.47 | 773 | 45.12 | 0.0 | Pantothenate kinase 4 OS Homo sapiens GN PANK4 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q923S8|PANK4_RAT | 84 | 909 | + | 826 | Gaps:108 | 95.47 | 773 | 45.26 | 0.0 | Pantothenate kinase 4 OS Rattus norvegicus GN Pank4 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q80YV4|PANK4_MOUSE | 84 | 909 | + | 826 | Gaps:117 | 95.73 | 820 | 43.06 | 4e-177 | Pantothenate kinase 4 OS Mus musculus GN Pank4 PE 1 SV 2 |
blastp_uniprot_sprot | sp|O80765|PANK1_ARATH | 80 | 475 | + | 396 | Gaps:30 | 97.65 | 383 | 66.84 | 1e-147 | Pantothenate kinase 1 OS Arabidopsis thaliana GN COAA PE 2 SV 2 |
blastp_uniprot_sprot | sp|O74962|PANK_SCHPO | 48 | 433 | + | 386 | Gaps:26 | 92.31 | 403 | 45.70 | 1e-82 | Pantothenate kinase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC4B4.01c PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q04430|PANK_YEAST | 84 | 436 | + | 353 | Gaps:85 | 93.73 | 367 | 44.48 | 2e-64 | Pantothenate kinase CAB1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN CAB1 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q949P3|Y2734_ARATH | 542 | 908 | + | 367 | Gaps:42 | 89.65 | 367 | 41.03 | 2e-63 | Uncharacterized protein At2g17340 OS Arabidopsis thaliana GN At2g17340 PE 1 SV 1 |
13 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
PANTHER | 552 | 806 | 255 | PTHR12280 | none | none | none |
TIGRFAM | 88 | 432 | 345 | TIGR00555 | "KEGG:00770+2.7.1.33","MetaCyc:PWY-3961","Reactome:REACT_11193","UniPathway:UPA00241" | panK_eukar: pantothenate kinase | IPR004567 |
SUPERFAMILY | 86 | 228 | 143 | SSF53067 | none | none | none |
PANTHER | 39 | 458 | 420 | PTHR12280 | none | none | none |
Pfam | 619 | 898 | 280 | PF01937 | none | Protein of unknown function DUF89 | IPR002791 |
PANTHER | 829 | 909 | 81 | PTHR12280 | none | none | none |
SUPERFAMILY | 200 | 433 | 234 | SSF53067 | none | none | none |
PANTHER | 829 | 909 | 81 | PTHR12280:SF20 | none | none | none |
PANTHER | 39 | 458 | 420 | PTHR12280:SF20 | none | none | none |
PANTHER | 552 | 806 | 255 | PTHR12280:SF20 | none | none | none |
Pfam | 87 | 433 | 347 | PF03630 | "KEGG:00770+2.7.1.33","MetaCyc:PWY-3961","Reactome:REACT_11193","UniPathway:UPA00241" | Fumble | IPR004567 |
SUPERFAMILY | 527 | 910 | 384 | SSF111321 | none | none | IPR002791 |
PIRSF | 42 | 912 | 871 | PIRSF036939 | "KEGG:00770+2.7.1.33","MetaCyc:PWY-3961","UniPathway:UPA00241" | none | IPR015844 |
17 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Champenoux_2015_nPriLBD_3P | Qrob_Chr10 | 10 | v_15000_157 | v_15000_310 | 15,68 | 15,9 | 15,91 | lod | 2.4 | 5.5 |
Bourran2_2014_nSecLBD_3P | Qrob_Chr08 | 8 | s_1BN2OD_551 | s_1B5AYF_599 | 17,17 | 0 | 43,51 | lod | 1,9229 | 4,4 |
Bourran2_2014_nLBD*_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,25 | 0 | 35,55 | lod | 2,5951 | 6 |
Bourran2_2014_nP*_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,19 | 0 | 31,97 | lod | 2,8472 | 6 |
Bourran2_2002_QTL11_peak_Bud_burst_A4 | Qrob_Chr06 | 6 | s_1C41PA_791 | s_1AM1AV_1141 | 19,17 | 0 | 34,57 | lod | 2,3 | 2,9 |
Bourran2_2014_aSeqBC_3P | Qrob_Chr06 | 6 | v_506_189 | v_686_77 | 30,72 | 13,58 | 43,48 | lod | 2,2746 | 6,3 |
Bourran2_2014_aSeqBC*_A4 | Qrob_Chr06 | 6 | s_2F5MK3_712 | v_444_355 | 27,13 | 14,86 | 39,46 | lod | 3,7847 | 9,8 |
Bourran2_2014_nEpis*_3P | Qrob_Chr08 | 8 | s_1DA4QW_688 | s_1DNI7D_820 | 17,96 | 0 | 37,75 | lod | 2,9745 | 7,5 |
Bourran2_2014_nEpis*_A4 | Qrob_Chr07 | 7 | v_12400_446 | s_1BPEBU_1211 | 6,93 | 0 | 15,13 | lod | 4,7411 | 11 |
Bourran2_2014_nFork*_3P | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,28 | 7,43 | 41,48 | lod | 2,4044 | 5,5 |
Bourran2_2014_nLBD_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 37,41 | 9,8 | 50,1 | lod | 1,9524 | 4,1 |
Bourran2_2014_nPriBD_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,51 | 3,36 | 51,86 | lod | 1,6747 | 3,9 |
Bourran2_2014_nPriLBD*_3P | Qrob_Chr11 | 11 | v_12066_307 | s_1B15GJ_447 | 3,37 | 0,57 | 16,17 | lod | 3,4299 | 6,9 |
Bourran2_2014_nSecLBD_A4 | Qrob_Chr07 | 7 | v_8327_222 | s_1A4WGY_363 | 16,04 | 0 | 44,69 | lod | 2,6373 | 6,5 |
Bourran2_2014_vEpiBC_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 37,55 | 14,41 | 50,01 | lod | 1,7882 | 4,8 |
Champenoux_2015_nEpis_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,53 | 25,47 | 27,72 | lod | 4.4 | 8.9 |
Champenoux_2015_nP_3P | Qrob_Chr06 | 6 | s_1A386O_228 | s_1AYZFS_603 | 27,03 | 26,47 | 27,34 | lod | 2.8 | 7.2 |