Protein : Qrob_P0047250.2 Q. robur
Protein Identifier  ? Qrob_P0047250.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME (NIFU HOMOLOG) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 169  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005506 iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
GO:0051536 iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
GO:0016226 iron-sulfur cluster assembly The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1510480 1 168 + 168 Gaps:8 96.39 166 83.12 2e-91 nitrogen fixation protein nifu putative
blastp_kegg lcl|tcc:TCM_012081 1 166 + 166 Gaps:3 95.32 171 80.37 3e-90 SufE/NifU family protein
blastp_kegg lcl|gmx:100806169 1 165 + 165 Gaps:6 94.77 172 79.14 1e-88 iron-sulfur cluster assembly protein 1-like
blastp_kegg lcl|pmum:103338351 1 165 + 165 Gaps:1 94.80 173 79.27 2e-88 iron-sulfur cluster assembly protein 1-like
blastp_kegg lcl|gmx:100812566 1 166 + 166 Gaps:9 95.15 165 82.80 3e-88 iron-sulfur cluster assembly enzyme ISCU mitochondrial-like
blastp_kegg lcl|pxb:103953016 1 168 + 168 Gaps:1 95.98 174 77.25 7e-88 iron-sulfur cluster assembly protein 1-like
blastp_kegg lcl|mdm:103437707 1 166 + 166 Gaps:1 95.38 173 78.18 8e-88 iron-sulfur cluster assembly protein 1-like
blastp_kegg lcl|tcc:TCM_025125 1 166 + 166 Gaps:31 95.94 197 71.43 2e-87 SufE/NifU family protein isoform 1
blastp_kegg lcl|pvu:PHAVU_003G201000g 1 166 + 166 Gaps:9 95.15 165 81.53 2e-87 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa012356mg 1 165 + 165 Gaps:1 94.80 173 78.66 2e-87 hypothetical protein
blastp_pdb 2l4x_A 33 156 + 124 Gaps:1 96.09 128 72.36 7e-62 mol:protein length:128 Iron-sulfur cluster assembly scaffold protein
blastp_pdb 3lvl_A 33 156 + 124 Gaps:1 95.35 129 72.36 7e-62 mol:protein length:129 NifU-like protein
blastp_pdb 1r9p_A 33 156 + 124 Gaps:1 91.79 134 73.17 1e-61 mol:protein length:134 NifU-like protein
blastp_pdb 1q48_A 33 156 + 124 Gaps:1 91.79 134 73.17 1e-61 mol:protein length:134 NifU-like protein
blastp_pdb 1wfz_A 42 161 + 120 Gaps:1 91.54 130 78.15 5e-61 mol:protein length:130 nitrogen fixation cluster-like
blastp_pdb 2kqk_A 33 156 + 124 Gaps:1 96.09 128 71.54 1e-60 mol:protein length:128 NifU-like protein
blastp_pdb 4eb7_C 32 158 + 127 Gaps:6 80.39 153 48.78 1e-32 mol:protein length:153 NifU protein (NifU-1)
blastp_pdb 4eb5_D 32 158 + 127 Gaps:6 80.39 153 48.78 1e-32 mol:protein length:153 NifU protein (NifU-1)
blastp_pdb 4eb5_C 32 158 + 127 Gaps:6 80.39 153 48.78 1e-32 mol:protein length:153 NifU protein (NifU-1)
blastp_pdb 2z7e_C 33 164 + 132 Gaps:4 82.80 157 44.62 1e-30 mol:protein length:157 NifU-like protein
blastp_uniprot_sprot sp|O49627|ISU1_ARATH 1 167 + 167 Gaps:5 97.01 167 79.01 6e-88 Iron-sulfur cluster assembly protein 1 OS Arabidopsis thaliana GN ISU1 PE 2 SV 1
blastp_uniprot_sprot sp|O81433|ISU3_ARATH 1 161 + 161 Gaps:8 90.64 171 72.90 2e-77 Iron-sulfur cluster assembly protein 3 OS Arabidopsis thaliana GN ISU3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9H1K1|ISCU_HUMAN 23 164 + 142 Gaps:1 84.43 167 72.34 2e-69 Iron-sulfur cluster assembly enzyme ISCU mitochondrial OS Homo sapiens GN ISCU PE 1 SV 2
blastp_uniprot_sprot sp|Q9D7P6|ISCU_MOUSE 23 156 + 134 Gaps:1 79.17 168 75.19 1e-68 Iron-sulfur cluster assembly enzyme ISCU mitochondrial OS Mus musculus GN Iscu PE 1 SV 1
blastp_uniprot_sprot sp|Q6CRQ9|ISU1_KLULA 8 156 + 149 Gaps:1 83.33 180 67.33 5e-68 Iron sulfur cluster assembly protein 1 mitochondrial OS Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN ISU1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9MAB6|ISU2_ARATH 1 163 + 163 Gaps:11 94.48 163 71.43 9e-68 Iron-sulfur cluster assembly protein 2 OS Arabidopsis thaliana GN ISU2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6BGU0|ISU1_DEBHA 4 157 + 154 Gaps:7 89.94 179 63.98 2e-67 Iron sulfur cluster assembly protein 1 mitochondrial OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN ISU1 PE 3 SV 1
blastp_uniprot_sprot sp|Q03020|ISU1_YEAST 19 156 + 138 Gaps:9 89.09 165 67.35 2e-64 Iron sulfur cluster assembly protein 1 mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ISU1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6CFQ0|ISU1_YARLI 20 160 + 141 Gaps:1 77.35 181 67.86 8e-63 Iron sulfur cluster assembly protein 1 mitochondrial OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN ISU1 PE 3 SV 1
blastp_uniprot_sprot sp|Q12056|ISU2_YEAST 20 159 + 140 none 89.74 156 66.43 5e-62 Iron sulfur cluster assembly protein 2 mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ISU2 PE 1 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 32 158 127 G3DSA:3.90.1010.10 none none none
PANTHER 31 165 135 PTHR10093 none none none
Pfam 32 158 127 PF01592 none NifU-like N terminal domain IPR002871
SUPERFAMILY 32 158 127 SSF82649 none none none
TIGRFAM 33 156 124 TIGR01999 none iscU: FeS cluster assembly scaffold IscU IPR011339

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 89   Mitochondrion 3 0.045 0.636 NON-PLANT 89