Protein : Qrob_P0044150.2 Q. robur
Protein Identifier  ? Qrob_P0044150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) 2.3.3.16 - Citrate synthase (unknown stereospecificity). Code Enzyme  EC:2.3.3.16
Gene Prediction Quality  validated Protein length 

Sequence

Length: 516  
Kegg Orthology  K01647
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0044262 cellular carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.
GO:0006099 tricarboxylic acid cycle A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10014944mg 1 514 + 514 Gaps:8 99.81 513 88.28 0.0 hypothetical protein
blastp_kegg lcl|cit:102629069 1 514 + 514 Gaps:8 99.81 513 88.28 0.0 citrate synthase glyoxysomal-like
blastp_kegg lcl|fve:101299699 12 515 + 504 Gaps:5 98.42 507 89.38 0.0 citrate synthase glyoxysomal-like
blastp_kegg lcl|pxb:103931748 1 515 + 515 Gaps:3 100.00 512 87.30 0.0 citrate synthase glyoxysomal
blastp_kegg lcl|pper:PRUPE_ppa004363mg 1 515 + 515 Gaps:5 100.00 514 87.35 0.0 hypothetical protein
blastp_kegg lcl|mdm:103417230 1 515 + 515 Gaps:3 100.00 512 87.11 0.0 citrate synthase glyoxysomal
blastp_kegg lcl|vvi:100255795 8 515 + 508 Gaps:5 99.02 512 87.18 0.0 citrate synthase-like
blastp_kegg lcl|pxb:103941528 1 515 + 515 Gaps:5 100.00 514 86.58 0.0 citrate synthase glyoxysomal
blastp_kegg lcl|pmum:103328745 12 515 + 504 Gaps:4 98.05 514 87.90 0.0 citrate synthase glyoxysomal
blastp_kegg lcl|mdm:103443220 1 515 + 515 Gaps:5 100.00 514 86.38 0.0 citrate synthase glyoxysomal
blastp_pdb 2h12_F 52 488 + 437 Gaps:16 98.39 436 46.85 2e-127 mol:protein length:436 Citrate synthase
blastp_pdb 2h12_E 52 488 + 437 Gaps:16 98.39 436 46.85 2e-127 mol:protein length:436 Citrate synthase
blastp_pdb 2h12_D 52 488 + 437 Gaps:16 98.39 436 46.85 2e-127 mol:protein length:436 Citrate synthase
blastp_pdb 2h12_C 52 488 + 437 Gaps:16 98.39 436 46.85 2e-127 mol:protein length:436 Citrate synthase
blastp_pdb 2h12_B 52 488 + 437 Gaps:16 98.39 436 46.85 2e-127 mol:protein length:436 Citrate synthase
blastp_pdb 2h12_A 52 488 + 437 Gaps:16 98.39 436 46.85 2e-127 mol:protein length:436 Citrate synthase
blastp_pdb 4e6y_A 94 488 + 395 Gaps:10 90.51 432 47.06 3e-125 mol:protein length:432 Citrate synthase
blastp_pdb 3l99_B 94 488 + 395 Gaps:23 91.55 426 46.41 8e-118 mol:protein length:426 Citrate synthase
blastp_pdb 3l99_A 94 488 + 395 Gaps:23 91.55 426 46.41 8e-118 mol:protein length:426 Citrate synthase
blastp_pdb 3l98_B 94 488 + 395 Gaps:23 91.55 426 46.41 8e-118 mol:protein length:426 Citrate synthase
blastp_uniprot_sprot sp|P49299|CYSZ_CUCMA 9 515 + 507 Gaps:4 98.26 516 86.79 0.0 Citrate synthase glyoxysomal OS Cucurbita maxima PE 1 SV 1
blastp_uniprot_sprot sp|Q9LXS6|CISY2_ARATH 6 513 + 508 Gaps:6 99.22 514 83.73 0.0 Citrate synthase 2 peroxisomal OS Arabidopsis thaliana GN CSY2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SJH7|CISY3_ARATH 6 515 + 510 Gaps:12 99.80 509 83.46 0.0 Citrate synthase 3 peroxisomal OS Arabidopsis thaliana GN CSY3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LXS7|CISY1_ARATH 9 488 + 480 Gaps:10 98.75 480 76.16 0.0 Citrate synthase 1 peroxisomal OS Arabidopsis thaliana GN CSY1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8MQU6|CISYP_DICDI 57 511 + 455 Gaps:4 91.67 492 59.65 0.0 Citrate synthase peroxisomal OS Dictyostelium discoideum GN cshA PE 2 SV 1
blastp_uniprot_sprot sp|Q86AV6|CISYC_DICDI 56 509 + 454 Gaps:1 88.48 512 55.85 0.0 Citrate synthase OS Dictyostelium discoideum GN gltA PE 3 SV 1
blastp_uniprot_sprot sp|P94325|CISY_BRADU 53 488 + 436 Gaps:21 98.39 434 49.18 2e-136 Citrate synthase OS Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN gltA PE 3 SV 2
blastp_uniprot_sprot sp|Q10530|CISY1_MYCTU 95 488 + 394 Gaps:13 90.72 431 50.90 9e-135 Citrate synthase 1 OS Mycobacterium tuberculosis GN gltA2 PE 1 SV 1
blastp_uniprot_sprot sp|O33915|CISY_RHIME 57 488 + 432 Gaps:15 99.07 429 47.76 4e-132 Citrate synthase OS Rhizobium meliloti (strain 1021) GN gltA PE 1 SV 2
blastp_uniprot_sprot sp|P51038|CISY2_RHITR 76 488 + 413 Gaps:20 97.67 429 47.49 5e-131 Citrate synthase plasmid OS Rhizobium tropici GN pcsA PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 228 241 14 PR00143 none Citrate synthase signature IPR002020
PRINTS 304 332 29 PR00143 none Citrate synthase signature IPR002020
PRINTS 357 377 21 PR00143 none Citrate synthase signature IPR002020
PRINTS 439 453 15 PR00143 none Citrate synthase signature IPR002020
PRINTS 282 297 16 PR00143 none Citrate synthase signature IPR002020
PRINTS 419 435 17 PR00143 none Citrate synthase signature IPR002020
Gene3D 344 433 90 G3DSA:1.10.230.10 none none IPR016143
SUPERFAMILY 77 488 412 SSF48256 none none IPR016141
PANTHER 27 493 467 PTHR11739:SF1 none none none
PANTHER 27 493 467 PTHR11739 none none IPR002020
Pfam 102 470 369 PF00285 none Citrate synthase IPR002020
Gene3D 109 343 235 G3DSA:1.10.580.10 "UniPathway:UPA00223" none IPR016142
ProSitePatterns 364 376 13 PS00480 "UniPathway:UPA00223" Citrate synthase signature. IPR019810

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 111   Mitochondrion 5 0.140 0.411 NON-PLANT 111