Protein : Qrob_P0042480.2 Q. robur
Protein Identifier  ? Qrob_P0042480.2 Organism . Name  Quercus robur
Score  90.0 Score Type  egn
Protein Description  (M=1) PTHR11739:SF8 - CITRATE SYNTHASE, MITOCHONDRIAL (PTHR11739:SF8) Code Enzyme  EC:2.3.3.16
Gene Prediction Quality  validated Protein length 

Sequence

Length: 424  
Kegg Orthology  K01647
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0004108 citrate (Si)-synthase activity Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA, where the acetyl group is added to the si-face of oxaloacetate; acetyl-CoA thus provides the two carbon atoms of the pro-S carboxymethyl group.
GO:0044262 cellular carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.
GO:0006099 tricarboxylic acid cycle A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103499882 1 385 + 385 Gaps:13 84.50 471 86.93 0.0 citrate synthase mitochondrial
blastp_kegg lcl|csv:101227011 1 385 + 385 Gaps:13 84.50 471 86.43 0.0 citrate synthase mitochondrial-like
blastp_kegg lcl|csv:101220412 1 385 + 385 Gaps:13 84.50 471 86.43 0.0 citrate synthase mitochondrial-like
blastp_kegg lcl|mdm:103413538 1 385 + 385 Gaps:13 84.14 473 85.68 0.0 citrate synthase mitochondrial
blastp_kegg lcl|pxb:103954922 1 385 + 385 Gaps:13 84.14 473 85.43 0.0 citrate synthase mitochondrial
blastp_kegg lcl|cit:102577950 1 385 + 385 Gaps:13 84.50 471 85.43 0.0 citrate synthase (EC:2.3.3.1)
blastp_kegg lcl|pper:PRUPE_ppa005193mg 1 385 + 385 Gaps:13 84.14 473 84.92 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_005948 1 385 + 385 Gaps:13 84.50 471 85.93 0.0 Citrate synthase family protein
blastp_kegg lcl|pxb:103945808 1 385 + 385 Gaps:13 84.14 473 84.92 0.0 citrate synthase mitochondrial
blastp_kegg lcl|cic:CICLE_v10031423mg 1 385 + 385 Gaps:16 84.40 468 85.32 0.0 hypothetical protein
blastp_pdb 2cts_A 39 384 + 346 Gaps:1 79.41 437 60.52 6e-161 mol:protein length:437 CITRATE SYNTHASE
blastp_pdb 4cts_B 39 384 + 346 Gaps:1 79.41 437 60.52 1e-160 mol:protein length:437 CITRATE SYNTHASE
blastp_pdb 4cts_A 39 384 + 346 Gaps:1 79.41 437 60.52 1e-160 mol:protein length:437 CITRATE SYNTHASE
blastp_pdb 3enj_A 39 384 + 346 Gaps:1 79.41 437 60.52 1e-160 mol:protein length:437 Citrate synthase
blastp_pdb 1cts_A 39 384 + 346 Gaps:1 79.41 437 60.52 1e-160 mol:protein length:437 CITRATE SYNTHASE
blastp_pdb 1css_A 39 384 + 346 Gaps:1 79.77 435 59.65 7e-158 mol:protein length:435 CITRATE SYNTHASE
blastp_pdb 1csr_A 39 384 + 346 Gaps:1 79.77 435 59.65 7e-158 mol:protein length:435 CITRATE SYNTHASE
blastp_pdb 1csi_A 39 384 + 346 Gaps:1 79.77 435 59.65 7e-158 mol:protein length:435 CITRATE SYNTHASE
blastp_pdb 1csh_A 39 384 + 346 Gaps:1 79.77 435 59.65 7e-158 mol:protein length:435 CITRATE SYNTHASE
blastp_pdb 1amz_A 39 384 + 346 Gaps:1 79.77 435 59.65 7e-158 mol:protein length:435 CITRATE SYNTHASE
blastp_uniprot_sprot sp|P49298|CISY_CITMA 2 385 + 384 Gaps:13 84.29 471 83.63 0.0 Citrate synthase mitochondrial OS Citrus maxima GN CIT PE 2 SV 1
blastp_uniprot_sprot sp|O80433|CISY_DAUCA 1 385 + 385 Gaps:14 84.53 472 81.70 0.0 Citrate synthase mitochondrial OS Daucus carota GN CS PE 2 SV 1
blastp_uniprot_sprot sp|P20115|CISY4_ARATH 1 385 + 385 Gaps:14 84.18 474 80.45 0.0 Citrate synthase 4 mitochondrial OS Arabidopsis thaliana GN CSY4 PE 1 SV 3
blastp_uniprot_sprot sp|Q9M1D3|CISY5_ARATH 1 385 + 385 Gaps:20 84.27 464 80.31 0.0 Citrate synthase 5 mitochondrial OS Arabidopsis thaliana GN CSY5 PE 1 SV 2
blastp_uniprot_sprot sp|Q43175|CISY_SOLTU 1 385 + 385 Gaps:17 84.93 471 77.00 0.0 Citrate synthase mitochondrial OS Solanum tuberosum PE 2 SV 1
blastp_uniprot_sprot sp|P83372|CISY_FRAAN 1 385 + 385 Gaps:28 84.22 469 78.99 0.0 Citrate synthase mitochondrial OS Fragaria ananassa GN MCSI PE 1 SV 1
blastp_uniprot_sprot sp|Q17GM7|CISY1_AEDAE 38 385 + 348 Gaps:1 74.73 467 64.18 4e-168 Probable citrate synthase 1 mitochondrial OS Aedes aegypti GN AAEL002956 PE 3 SV 1
blastp_uniprot_sprot sp|Q16P20|CISY2_AEDAE 38 385 + 348 Gaps:1 74.73 467 64.18 4e-168 Probable citrate synthase 2 mitochondrial OS Aedes aegypti GN AAEL011789 PE 3 SV 1
blastp_uniprot_sprot sp|Q0QHL3|CISY_GLOMM 21 385 + 365 Gaps:10 80.65 465 61.87 6e-168 Probable citrate synthase mitochondrial OS Glossina morsitans morsitans PE 2 SV 1
blastp_uniprot_sprot sp|Q9W401|CISY_DROME 38 385 + 348 Gaps:1 75.22 464 65.04 2e-166 Probable citrate synthase mitochondrial OS Drosophila melanogaster GN kdn PE 2 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 35 385 351 TIGR01793 "UniPathway:UPA00223" cit_synth_euk: citrate (Si)-synthase, eukaryotic IPR010109
Gene3D 34 342 309 G3DSA:1.10.580.10 "UniPathway:UPA00223" none IPR016142
ProSitePatterns 335 347 13 PS00480 "UniPathway:UPA00223" Citrate synthase signature. IPR019810
Pfam 63 382 320 PF00285 none Citrate synthase IPR002020
PANTHER 38 385 348 PTHR11739 none none IPR002020
PRINTS 328 348 21 PR00143 none Citrate synthase signature IPR002020
PRINTS 197 210 14 PR00143 none Citrate synthase signature IPR002020
PRINTS 245 260 16 PR00143 none Citrate synthase signature IPR002020
PRINTS 268 296 29 PR00143 none Citrate synthase signature IPR002020
PANTHER 38 385 348 PTHR11739:SF8 none none none
SUPERFAMILY 32 384 353 SSF48256 none none IPR016141

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 87   Mitochondrion 2 0.031 0.844 NON-PLANT 87