Protein : Qrob_P0041390.2 Q. robur
Protein Identifier  ? Qrob_P0041390.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR24423//PTHR24423:SF415 - TWO-COMPONENT SENSOR HISTIDINE KINASE // SUBFAMILY NOT NAMED Code Enzyme  EC:2.7.13.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1054  
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0016310 phosphorylation The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
GO:0016772 transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
GO:0004871 signal transducer activity Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO:0000155 phosphorelay sensor kinase activity Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
GO:0000160 phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103344546 31 1052 + 1022 Gaps:36 97.81 1051 61.58 0.0 histidine kinase CKI1-like
blastp_kegg lcl|pxb:103930567 8 1052 + 1045 Gaps:32 100.00 1047 59.50 0.0 histidine kinase CKI1-like
blastp_kegg lcl|mdm:103433874 8 1047 + 1040 Gaps:38 99.53 1053 58.68 0.0 histidine kinase CKI1-like
blastp_kegg lcl|tcc:TCM_026753 4 1052 + 1049 Gaps:38 98.87 1063 55.57 0.0 Histidine kinase cytokinin receptor putative
blastp_kegg lcl|cit:102617654 4 1050 + 1047 Gaps:33 96.45 1099 54.62 0.0 histidine kinase CKI1-like
blastp_kegg lcl|pop:POPTR_0013s01100g 78 1052 + 975 Gaps:36 98.60 1001 56.53 0.0 POPTRDRAFT_570723 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa001196mg 181 1052 + 872 Gaps:28 100.00 884 61.31 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1434760 149 1052 + 904 Gaps:36 100.00 912 56.25 0.0 histidine kinase 1 plant putative (EC:2.7.13.3)
blastp_kegg lcl|tcc:TCM_004796 31 1053 + 1023 Gaps:97 94.81 1137 46.57 0.0 Hybrid signal transduction histidine kinase E putative
blastp_kegg lcl|vvi:100241920 31 1052 + 1022 Gaps:68 94.77 1110 48.10 0.0 histidine kinase CKI1-like
blastp_pdb 3mmn_A 896 1053 + 158 Gaps:9 79.13 206 39.88 1e-27 mol:protein length:206 Histidine kinase homolog
blastp_pdb 3mm4_A 896 1053 + 158 Gaps:9 79.13 206 39.88 1e-27 mol:protein length:206 Histidine kinase homolog
blastp_pdb 2r25_B 919 1042 + 124 Gaps:14 85.71 133 47.37 1e-14 mol:protein length:133 Osmosensing histidine protein kinase SLN1
blastp_pdb 1oxk_L 919 1042 + 124 Gaps:14 85.07 134 47.37 1e-14 mol:protein length:134 SLN1
blastp_pdb 1oxk_J 919 1042 + 124 Gaps:14 85.07 134 47.37 1e-14 mol:protein length:134 SLN1
blastp_pdb 1oxk_H 919 1042 + 124 Gaps:14 85.07 134 47.37 1e-14 mol:protein length:134 SLN1
blastp_pdb 1oxk_F 919 1042 + 124 Gaps:14 85.07 134 47.37 1e-14 mol:protein length:134 SLN1
blastp_pdb 1oxk_D 919 1042 + 124 Gaps:14 85.07 134 47.37 1e-14 mol:protein length:134 SLN1
blastp_pdb 1oxk_B 919 1042 + 124 Gaps:14 85.07 134 47.37 1e-14 mol:protein length:134 SLN1
blastp_pdb 1oxb_B 919 1042 + 124 Gaps:14 85.07 134 47.37 1e-14 mol:protein length:134 SLN1
blastp_uniprot_sprot sp|O22267|CKI1_ARATH 42 1053 + 1012 Gaps:113 93.49 1122 38.23 0.0 Histidine kinase CKI1 OS Arabidopsis thaliana GN CKI1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SXL4|AHK1_ARATH 127 1046 + 920 Gaps:65 56.01 1207 32.10 1e-43 Histidine kinase 1 OS Arabidopsis thaliana GN AHK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9C5U0|AHK4_ARATH 303 1046 + 744 Gaps:46 43.24 1080 30.84 9e-29 Histidine kinase 4 OS Arabidopsis thaliana GN AHK4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C5U1|AHK3_ARATH 284 1051 + 768 Gaps:78 55.02 1036 28.77 1e-27 Histidine kinase 3 OS Arabidopsis thaliana GN AHK3 PE 1 SV 1
blastp_uniprot_sprot sp|Q7MD16|LUXQ_VIBVY 361 668 + 308 Gaps:63 32.09 857 34.55 2e-26 Autoinducer 2 sensor kinase/phosphatase LuxQ OS Vibrio vulnificus (strain YJ016) GN luxQ PE 3 SV 1
blastp_uniprot_sprot sp|Q8D5Z6|LUXQ_VIBVU 361 668 + 308 Gaps:63 32.09 857 34.55 2e-26 Autoinducer 2 sensor kinase/phosphatase LuxQ OS Vibrio vulnificus (strain CMCP6) GN luxQ PE 3 SV 1
blastp_uniprot_sprot sp|P48027|GACS_PSESY 361 1046 + 686 Gaps:77 42.89 907 34.70 5e-26 Sensor protein GacS OS Pseudomonas syringae pv. syringae GN gacS PE 3 SV 1
blastp_uniprot_sprot sp|Q9KLK7|LUXQ_VIBCH 361 732 + 372 Gaps:74 35.94 857 31.49 1e-23 Autoinducer 2 sensor kinase/phosphatase LuxQ OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN luxQ PE 1 SV 1
blastp_uniprot_sprot sp|Q9C5U2|AHK2_ARATH 321 1048 + 728 Gaps:55 38.52 1176 30.02 8e-23 Histidine kinase 2 OS Arabidopsis thaliana GN AHK2 PE 1 SV 1
blastp_uniprot_sprot sp|P54302|LUXQ_VIBHA 363 671 + 309 Gaps:65 32.60 859 31.43 9e-23 Autoinducer 2 sensor kinase/phosphatase LuxQ OS Vibrio harveyi GN luxQ PE 1 SV 1

31 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 568 582 15 PR00344 none Bacterial sensor protein C-terminal signature IPR004358
PRINTS 602 620 19 PR00344 none Bacterial sensor protein C-terminal signature IPR004358
PANTHER 839 1018 180 PTHR24423 none none none
PANTHER 563 657 95 PTHR24423 none none none
Phobius 303 321 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 361 521 161 PTHR24423 none none none
PANTHER 2 12 11 PTHR24423 none none none
Gene3D 563 648 86 G3DSA:3.30.565.10 none none IPR003594
Gene3D 437 519 83 G3DSA:3.30.565.10 none none IPR003594
Gene3D 915 1048 134 G3DSA:3.40.50.2300 none none none
SUPERFAMILY 360 439 80 SSF47384 none none IPR009082
SUPERFAMILY 567 642 76 SSF55874 none none IPR003594
SUPERFAMILY 426 521 96 SSF55874 none none IPR003594
Phobius 283 302 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 487 644 158 SM00387 none Histidine kinase-like ATPases IPR003594
Pfam 373 437 65 PF00512 none His Kinase A (phospho-acceptor) domain IPR003661
Pfam 487 642 156 PF02518 none Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594
Phobius 322 342 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 363 433 71 G3DSA:1.10.287.130 none none IPR003661
PANTHER 839 1018 180 PTHR24423:SF415 none none none
PANTHER 563 657 95 PTHR24423:SF415 none none none
SMART 371 437 67 SM00388 none His Kinase A (phosphoacceptor) domain IPR003661
Pfam 921 1047 127 PF00072 "Reactome:REACT_14797" Response regulator receiver domain IPR001789
PANTHER 361 521 161 PTHR24423:SF415 none none none
ProSiteProfiles 378 644 267 PS50109 "Reactome:REACT_1046" Histidine kinase domain profile. IPR005467
SUPERFAMILY 916 1049 134 SSF52172 none none IPR011006
Phobius 343 1053 711 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 919 1050 132 PS50110 "Reactome:REACT_14797" Response regulatory domain profile. IPR001789
PANTHER 2 12 11 PTHR24423:SF415 none none none
SMART 918 1046 129 SM00448 "Reactome:REACT_14797" cheY-homologous receiver domain IPR001789

1 Localization

Analysis Start End Length
TMHMM 320 342 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting