Protein : Qrob_P0040800.2 Q. robur
Protein Identifier  ? Qrob_P0040800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=11) PTHR22595:SF37 - CHITINASE-RELATED (PTHR22595:SF37) Code Enzyme  EC:3.2.1.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 282  
Kegg Orthology  K01183
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0019s12360g 1 281 + 281 Gaps:6 100.00 275 76.36 2e-152 POPTRDRAFT_574380 hypothetical protein
blastp_kegg lcl|mdm:103432770 4 281 + 278 Gaps:6 100.00 272 72.43 1e-144 endochitinase PR4-like
blastp_kegg lcl|vvi:100245803 1 281 + 281 Gaps:7 100.00 274 71.53 1e-143 endochitinase PR4-like
blastp_kegg lcl|pmum:103322428 10 281 + 272 Gaps:7 96.36 275 72.45 5e-143 endochitinase PR4-like
blastp_kegg lcl|vvi:100256098 1 281 + 281 Gaps:7 100.00 274 71.17 1e-142 endochitinase PR4-like
blastp_kegg lcl|fve:101291199 3 281 + 279 Gaps:4 97.17 283 69.82 2e-142 endochitinase PR4-like
blastp_kegg lcl|pop:POPTR_0013s12870g 2 281 + 280 Gaps:9 100.00 275 70.91 3e-141 class IV chitinase family protein
blastp_kegg lcl|pper:PRUPE_ppa009844mg 10 281 + 272 Gaps:7 96.36 275 72.08 4e-141 hypothetical protein
blastp_kegg lcl|tcc:TCM_019914 1 281 + 281 Gaps:9 99.63 273 70.22 2e-140 Carrot EP3-3 chitinase
blastp_kegg lcl|pper:PRUPE_ppa024941mg 1 281 + 281 Gaps:5 100.00 276 71.38 7e-138 hypothetical protein
blastp_pdb 3hbh_A 79 281 + 203 Gaps:7 100.00 204 57.35 8e-74 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbe_X 79 281 + 203 Gaps:7 100.00 204 57.35 8e-74 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbd_A 79 281 + 203 Gaps:7 100.00 204 57.35 8e-74 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 2z38_A 78 281 + 204 Gaps:36 96.36 247 37.82 3e-52 mol:protein length:247 Chitinase
blastp_pdb 1cns_B 79 281 + 203 Gaps:35 97.12 243 43.22 3e-52 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 79 281 + 203 Gaps:35 97.12 243 43.22 3e-52 mol:protein length:243 CHITINASE
blastp_pdb 3iwr_B 34 281 + 248 Gaps:38 90.61 309 38.21 7e-52 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 34 281 + 248 Gaps:38 90.61 309 38.21 7e-52 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 34 281 + 248 Gaps:38 90.61 309 38.21 7e-52 mol:protein length:309 chitinase
blastp_pdb 2z37_D 79 281 + 203 Gaps:36 97.13 244 37.55 1e-51 mol:protein length:244 Chitinase
blastp_uniprot_sprot sp|P27054|CHI4_PHAVU 24 281 + 258 Gaps:7 93.70 270 70.36 3e-127 Endochitinase PR4 OS Phaseolus vulgaris GN CHI4 PE 2 SV 1
blastp_uniprot_sprot sp|Q06209|CHI4_BRANA 11 281 + 271 Gaps:8 98.13 268 65.78 7e-118 Basic endochitinase CHB4 OS Brassica napus PE 1 SV 2
blastp_uniprot_sprot sp|Q7Y1Z0|CHI5_ORYSJ 25 281 + 257 Gaps:7 91.67 288 63.64 1e-115 Chitinase 5 OS Oryza sativa subsp. japonica GN Cht5 PE 2 SV 1
blastp_uniprot_sprot sp|O04138|CHI4_ORYSJ 30 281 + 252 Gaps:6 90.53 285 62.02 2e-111 Chitinase 4 OS Oryza sativa subsp. japonica GN Cht4 PE 2 SV 2
blastp_uniprot_sprot sp|P42820|CHIP_BETVU 2 281 + 280 Gaps:14 100.00 288 59.03 4e-106 Acidic endochitinase SP2 OS Beta vulgaris GN SP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6K8R2|CHI6_ORYSJ 30 281 + 252 Gaps:10 90.77 271 60.57 1e-102 Chitinase 6 OS Oryza sativa subsp. japonica GN Cht6 PE 2 SV 1
blastp_uniprot_sprot sp|P29022|CHIA_MAIZE 30 281 + 252 Gaps:5 91.07 280 60.00 4e-102 Endochitinase A OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P29023|CHIB_MAIZE 13 281 + 269 Gaps:4 99.26 269 57.68 1e-100 Endochitinase B (Fragment) OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P80052|CHIT_DIOJA 30 281 + 252 Gaps:12 100.00 250 58.00 1e-95 Acidic endochitinase OS Dioscorea japonica PE 1 SV 2
blastp_uniprot_sprot sp|P52404|CHI2_SOLTU 34 281 + 248 Gaps:48 86.08 316 43.75 9e-67 Endochitinase 2 (Fragment) OS Solanum tuberosum GN CHTB2 PE 2 SV 1

25 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProDom 21 62 42 PD000609 none CHITIN-BINDING CHITINASE PRECURSOR SIGNAL GLYCOSIDASE HYDROLASE LECTIN DEGRADATION DIRECT SEQUENCING IPR001002
PANTHER 27 281 255 PTHR22595:SF37 none none none
Gene3D 158 209 52 G3DSA:3.30.20.10 none none none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
ProSiteProfiles 29 64 36 PS50941 none Chitin-binding type-1 domain profile. IPR001002
Gene3D 210 281 72 G3DSA:1.10.530.10 none none none
Gene3D 82 147 66 G3DSA:1.10.530.10 none none none
PRINTS 40 47 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 32 40 9 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 47 54 8 PR00451 none Chitin-binding domain signature IPR001002
Pfam 30 62 33 PF00187 none Chitin recognition protein IPR001002
Phobius 30 281 252 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 215 225 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
Pfam 83 281 199 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
SMART 31 62 32 SM00270 none Chitin binding domain IPR001002
Gene3D 29 73 45 G3DSA:3.30.60.10 none none IPR001002
PIRSF 2 281 280 PIRSF001060 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" none IPR016283
SUPERFAMILY 79 281 203 SSF53955 none none IPR023346
ProSitePatterns 34 53 20 PS00026 none Chitin recognition or binding domain signature. IPR018371
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 27 281 255 PTHR22595 none none none
Phobius 22 29 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 30 71 42 SSF57016 none none IPR001002
ProSitePatterns 100 122 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726

3 Localization

Analysis Start End Length
SignalP_EUK 1 29 28
SignalP_GRAM_POSITIVE 1 29 28
TMHMM 10 27 17

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 1 0.940 0.032 NON-PLANT 29