Protein : Qrob_P0039960.2 Q. robur
Protein Identifier  ? Qrob_P0039960.2 Organism . Name  Quercus robur
Score  84.0 Score Type  egn
Protein Description  (M=2) 1.14.11.30 - Hypoxia-inducible factor-asparagine dioxygenase. Code Enzyme  EC:1.14.11.30
Gene Prediction Quality  validated Protein length 

Sequence

Length: 676  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100247818 20 484 + 465 Gaps:18 92.72 508 66.45 0.0 uncharacterized LOC100247818
blastp_kegg lcl|pper:PRUPE_ppa004409mg 20 482 + 463 Gaps:25 92.37 511 68.43 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s23670g 20 482 + 463 Gaps:21 91.63 502 68.26 0.0 POPTRDRAFT_818683 hypothetical protein
blastp_kegg lcl|pxb:103960089 20 485 + 466 Gaps:57 92.69 547 62.13 0.0 uncharacterized LOC103960089
blastp_kegg lcl|cit:102619012 20 481 + 462 Gaps:56 93.58 545 59.02 0.0 jmjC domain-containing protein 7-like
blastp_kegg lcl|rcu:RCOM_0990470 20 482 + 463 Gaps:26 91.19 488 65.39 0.0 Hypoxia-inducible factor 1 alpha inhibitor putative
blastp_kegg lcl|fve:101308336 20 482 + 463 Gaps:56 89.34 563 59.44 0.0 uncharacterized protein LOC101308336
blastp_kegg lcl|tcc:TCM_004269 20 484 + 465 Gaps:55 92.34 548 58.70 0.0 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein putative isoform 2
blastp_kegg lcl|mdm:103432306 20 485 + 466 Gaps:57 93.37 543 59.76 0.0 uncharacterized LOC103432306
blastp_kegg lcl|pxb:103941891 20 482 + 463 Gaps:55 92.82 543 59.33 0.0 uncharacterized LOC103941891
blastp_pdb 3kcy_A 33 270 + 238 Gaps:59 67.16 335 27.56 3e-13 mol:protein length:335 Hypoxia-inducible factor 1-alpha inhibitor
blastp_pdb 3kcx_A 33 270 + 238 Gaps:59 67.16 335 27.56 3e-13 mol:protein length:335 Hypoxia-inducible factor 1-alpha inhibitor
blastp_pdb 3p3p_A 33 270 + 238 Gaps:59 64.47 349 27.56 4e-13 mol:protein length:349 Hypoxia-inducible factor 1-alpha inhibitor
blastp_pdb 3p3n_A 33 270 + 238 Gaps:59 64.47 349 27.56 4e-13 mol:protein length:349 Hypoxia-inducible factor 1-alpha inhibitor
blastp_pdb 3od4_A 33 270 + 238 Gaps:59 64.47 349 27.56 4e-13 mol:protein length:349 Hypoxia-inducible factor 1-alpha inhibitor
blastp_pdb 2wa4_A 33 270 + 238 Gaps:59 64.47 349 27.56 4e-13 mol:protein length:349 HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR
blastp_pdb 2wa3_A 33 270 + 238 Gaps:59 64.47 349 27.56 4e-13 mol:protein length:349 HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR
blastp_pdb 2w0x_A 33 270 + 238 Gaps:59 64.47 349 27.56 4e-13 mol:protein length:349 HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR
blastp_pdb 2cgo_A 33 270 + 238 Gaps:59 64.47 349 27.56 4e-13 mol:protein length:349 HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR
blastp_pdb 2cgn_A 33 270 + 238 Gaps:59 64.47 349 27.56 4e-13 mol:protein length:349 HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR
blastp_uniprot_sprot sp|P59723|HIF1N_DANRE 43 270 + 228 Gaps:54 63.95 344 29.55 2e-15 Hypoxia-inducible factor 1-alpha inhibitor OS Danio rerio GN hif1an PE 2 SV 2
blastp_uniprot_sprot sp|E1C7T6|TYW5_CHICK 32 269 + 238 Gaps:32 66.04 318 31.90 2e-14 tRNA wybutosine-synthesizing protein 5 OS Gallus gallus GN TYW5 PE 3 SV 1
blastp_uniprot_sprot sp|P0AAD5|TYRP_SHIFL 521 659 + 139 Gaps:33 42.68 403 31.98 2e-14 Tyrosine-specific transport protein OS Shigella flexneri GN tyrP PE 3 SV 1
blastp_uniprot_sprot sp|P0AAD4|TYRP_ECOLI 521 659 + 139 Gaps:33 42.68 403 31.98 2e-14 Tyrosine-specific transport protein OS Escherichia coli (strain K12) GN tyrP PE 1 SV 1
blastp_uniprot_sprot sp|Q9NWT6|HIF1N_HUMAN 33 270 + 238 Gaps:59 64.47 349 27.56 2e-12 Hypoxia-inducible factor 1-alpha inhibitor OS Homo sapiens GN HIF1AN PE 1 SV 2
blastp_uniprot_sprot sp|Q8BLR9|HIF1N_MOUSE 33 270 + 238 Gaps:65 64.47 349 28.00 5e-12 Hypoxia-inducible factor 1-alpha inhibitor OS Mus musculus GN Hif1an PE 1 SV 2
blastp_uniprot_sprot sp|A2RUC4|TYW5_HUMAN 106 269 + 164 Gaps:29 53.02 315 30.54 9e-12 tRNA wybutosine-synthesizing protein 5 OS Homo sapiens GN TYW5 PE 1 SV 1
blastp_uniprot_sprot sp|B2GUS6|KDM8_XENTR 135 268 + 134 Gaps:7 30.47 443 31.85 1e-11 Lysine-specific demethylase 8 OS Xenopus tropicalis GN kdm8 PE 2 SV 1
blastp_uniprot_sprot sp|Q55DF5|JMJCD_DICDI 10 264 + 255 Gaps:50 52.01 448 30.47 7e-11 JmjC domain-containing protein D OS Dictyostelium discoideum GN jcdD PE 4 SV 1
blastp_uniprot_sprot sp|Q54FG7|JMJCF_DICDI 135 268 + 134 Gaps:25 33.12 474 28.66 2e-10 JmjC domain-containing protein F OS Dictyostelium discoideum GN jcdF PE 4 SV 1

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 20 270 251 G3DSA:2.60.120.650 none none none
ProSiteProfiles 134 283 150 PS51184 none JmjC domain profile. IPR003347
Pfam 487 590 104 PF03222 none Tryptophan/tyrosine permease family IPR018227
Phobius 487 510 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 593 618 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 20 271 252 PF13621 none Cupin-like domain none
Phobius 511 521 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 630 646 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 112 367 256 PTHR12461:SF16 none none none
PANTHER 20 90 71 PTHR12461:SF16 none none none
Phobius 582 592 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 560 581 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 134 280 147 SM00558 none A domain family that is part of the cupin metalloenzyme superfamily. IPR003347
SUPERFAMILY 20 89 70 SSF51197 none none none
SUPERFAMILY 123 284 162 SSF51197 none none none
Phobius 1 486 486 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 522 540 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Coils 414 435 22 Coil none none none
Phobius 647 675 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 112 367 256 PTHR12461 none none none
PANTHER 20 90 71 PTHR12461 none none none
Phobius 541 559 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 619 629 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

5 Localization

Analysis Start End Length
TMHMM 522 544 22
TMHMM 593 615 22
TMHMM 630 652 22
TMHMM 487 509 22
TMHMM 559 581 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

0 Targeting