Protein : Qrob_P0039810.2 Q. robur
Protein Identifier  ? Qrob_P0039810.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 323  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0010s14120g 1 322 + 322 Gaps:1 100.00 321 80.06 0.0 POPTRDRAFT_769709 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10033372mg 1 322 + 322 Gaps:1 100.00 321 78.50 0.0 hypothetical protein
blastp_kegg lcl|cit:102619909 1 322 + 322 Gaps:1 100.00 321 78.19 0.0 clavaminate synthase-like protein At3g21360-like
blastp_kegg lcl|pmum:103341421 1 322 + 322 Gaps:2 100.00 322 79.19 0.0 clavaminate synthase-like protein At3g21360
blastp_kegg lcl|pper:PRUPE_ppa008704mg 1 322 + 322 Gaps:2 100.00 322 79.19 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0704530 1 322 + 322 Gaps:1 100.00 321 77.88 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0010s14110g 1 322 + 322 Gaps:1 100.00 321 77.88 0.0 hypothetical protein
blastp_kegg lcl|cmo:103504609 1 322 + 322 Gaps:2 100.00 322 77.64 0.0 clavaminate synthase-like protein At3g21360
blastp_kegg lcl|gmx:100782351 1 322 + 322 Gaps:1 100.00 321 80.69 0.0 clavaminate synthase-like protein At3g21360-like
blastp_kegg lcl|tcc:TCM_011883 1 322 + 322 Gaps:1 100.00 321 79.44 0.0 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein
blastp_pdb 2q4a_B 16 322 + 307 Gaps:16 96.06 330 41.64 7e-75 mol:protein length:330 Clavaminate synthase-like protein At3g21360
blastp_pdb 2q4a_A 16 322 + 307 Gaps:16 96.06 330 41.64 7e-75 mol:protein length:330 Clavaminate synthase-like protein At3g21360
blastp_pdb 1y0z_B 16 322 + 307 Gaps:16 96.06 330 41.64 7e-75 mol:protein length:330 protein product of AT3G21360
blastp_pdb 1y0z_A 16 322 + 307 Gaps:16 96.06 330 41.64 7e-75 mol:protein length:330 protein product of AT3G21360
blastp_uniprot_sprot sp|Q9LIG0|Y3136_ARATH 16 322 + 307 Gaps:16 96.06 330 41.64 2e-74 Clavaminate synthase-like protein At3g21360 OS Arabidopsis thaliana GN At3g21360 PE 1 SV 1
rpsblast_cdd gnl|CDD|165707 2 322 + 321 Gaps:1 100.00 320 80.94 1e-167 PLN00139 PLN00139 hypothetical protein Provisional.
rpsblast_cdd gnl|CDD|202339 33 321 + 289 Gaps:54 97.63 253 21.86 1e-19 pfam02668 TauD Taurine catabolism dioxygenase TauD TfdA family. This family consists of taurine catabolism dioxygenases of the TauD TfdA family. TauD from E. coli is a alpha-ketoglutarate-dependent taurine dioxygenase. This enzyme catalyzes the oxygenolytic release of sulfite from taurine. TfdA from Burkholderia sp. is a 2 4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase. TfdA from Alcaligenes eutrophus JMP134 is a 2 4-dichlorophenoxyacetate monooxygenase. Also included are gamma-Butyrobetaine hydroxylase enzymes EC:1.14.11.1.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 239 317 79 PTHR10696 none none none
SUPERFAMILY 12 319 308 SSF51197 none none none
Pfam 41 318 278 PF02668 "Reactome:REACT_13" Taurine catabolism dioxygenase TauD, TfdA family IPR003819
Gene3D 34 176 143 G3DSA:3.60.130.10 none none none
Gene3D 215 320 106 G3DSA:3.60.130.10 none none none
PANTHER 61 207 147 PTHR10696:SF21 none none none
PANTHER 239 317 79 PTHR10696:SF21 none none none
PANTHER 61 207 147 PTHR10696 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

0 Targeting