Protein : Qrob_P0039800.2 Q. robur
Protein Identifier  ? Qrob_P0039800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10106:SF0 - CYTOCHROME B561-RELATED Code Enzyme  EC:1.16.5.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 240  
Kegg Orthology  K08360
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103341422 1 238 + 238 Gaps:6 99.59 245 81.56 9e-135 probable transmembrane ascorbate ferrireductase 4
blastp_kegg lcl|pper:PRUPE_ppa010555mg 1 238 + 238 Gaps:6 99.59 245 81.56 3e-134 hypothetical protein
blastp_kegg lcl|mdm:103451687 1 238 + 238 Gaps:5 99.59 244 79.84 6e-132 probable transmembrane ascorbate ferrireductase 4
blastp_kegg lcl|pxb:103929206 1 231 + 231 Gaps:3 95.90 244 79.91 6e-130 probable transmembrane ascorbate ferrireductase 4
blastp_kegg lcl|vvi:100264480 14 238 + 225 Gaps:1 93.39 242 81.86 2e-128 probable transmembrane ascorbate ferrireductase 4-like
blastp_kegg lcl|tcc:TCM_011882 1 238 + 238 Gaps:4 80.67 300 78.51 7e-124 Cytochrome b561/ferric reductase transmembrane family protein
blastp_kegg lcl|pop:POPTR_0010s14100g 5 235 + 231 Gaps:4 95.82 239 82.10 1e-122 POPTRDRAFT_822158 cytochrome B561 family protein
blastp_kegg lcl|mtr:MTR_5g053250 15 238 + 224 Gaps:3 93.03 244 81.06 3e-121 Cytochrome b reductase
blastp_kegg lcl|cic:CICLE_v10032628mg 1 238 + 238 Gaps:6 99.57 235 82.05 2e-120 hypothetical protein
blastp_kegg lcl|gmx:100527512 13 238 + 226 Gaps:1 93.80 242 80.62 6e-120 uncharacterized LOC100527512
blastp_uniprot_sprot sp|Q9C540|ACFR4_ARATH 1 238 + 238 Gaps:13 99.58 236 66.38 6e-92 Probable transmembrane ascorbate ferrireductase 4 OS Arabidopsis thaliana GN CYB561D PE 2 SV 1
blastp_uniprot_sprot sp|Q9SWS1|ACFR2_ARATH 1 220 + 220 Gaps:4 95.65 230 45.45 1e-60 Probable transmembrane ascorbate ferrireductase 2 OS Arabidopsis thaliana GN CYB561B PE 2 SV 1
blastp_uniprot_sprot sp|Q6I681|ACET1_MAIZE 29 220 + 192 Gaps:4 81.36 236 42.71 9e-46 Ascorbate-specific transmembrane electron transporter 1 OS Zea mays GN ZCYB PE 1 SV 1
blastp_uniprot_sprot sp|C4IYS8|ACFR2_MAIZE 33 220 + 188 Gaps:4 79.66 236 43.62 2e-44 Ascorbate-specific transmembrane electron transporter 2 OS Zea mays PE 2 SV 1
blastp_uniprot_sprot sp|A3A9H6|ACET1_ORYSJ 25 220 + 196 Gaps:4 83.76 234 42.86 3e-43 Probable ascorbate-specific transmembrane electron transporter 1 OS Oryza sativa subsp. japonica GN Os02g0642300 PE 3 SV 1
blastp_uniprot_sprot sp|Q8L856|ACFR1_ARATH 13 217 + 205 Gaps:3 85.36 239 38.73 1e-40 Transmembrane ascorbate ferrireductase 1 OS Arabidopsis thaliana GN CYB561A PE 1 SV 1
blastp_uniprot_sprot sp|Q7XMK3|ACET2_ORYSJ 29 204 + 176 Gaps:4 74.58 236 40.91 4e-39 Probable ascorbate-specific transmembrane electron transporter 2 OS Oryza sativa subsp. japonica GN Os04g0533500 PE 2 SV 2
blastp_uniprot_sprot sp|Q53TN4|CYBR1_HUMAN 11 223 + 213 Gaps:9 74.83 286 35.05 3e-23 Cytochrome b reductase 1 OS Homo sapiens GN CYBRD1 PE 1 SV 1
blastp_uniprot_sprot sp|Q67ZF6|ACFR3_ARATH 15 208 + 194 Gaps:7 84.38 224 32.28 1e-22 Probable transmembrane ascorbate ferrireductase 3 OS Arabidopsis thaliana GN CYB561C PE 2 SV 1
blastp_uniprot_sprot sp|Q95204|CY561_SHEEP 14 214 + 201 Gaps:7 78.57 252 35.35 2e-21 Cytochrome b561 OS Ovis aries GN CYB561 PE 2 SV 1
rpsblast_cdd gnl|CDD|177985 5 238 + 234 Gaps:2 97.52 242 81.78 1e-106 PLN02351 PLN02351 cytochromes b561 family protein.
rpsblast_cdd gnl|CDD|178284 9 222 + 214 Gaps:4 92.24 232 50.93 2e-56 PLN02680 PLN02680 carbon-monoxide oxygenase.
rpsblast_cdd gnl|CDD|176496 41 184 + 144 Gaps:2 100.00 144 56.25 2e-48 cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561) including the carbon monoxide oxygenase ACYB-1. Cytochrome b(561) as found in plants similar to the Arabidopsis thaliana ACYB-1 gene product a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase catalyzing the reduction of Fe(3+) to Fe(2+) and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently and may have six alpha-helical trans-membrane segments.
rpsblast_cdd gnl|CDD|178406 1 219 + 219 Gaps:4 93.94 231 39.63 2e-38 PLN02810 PLN02810 carbon-monoxide oxygenase.
rpsblast_cdd gnl|CDD|190557 51 183 + 133 Gaps:4 100.00 137 48.91 1e-31 pfam03188 Cytochrom_B561 Eukaryotic cytochrome b561. Cytochrome b561 is a secretory vesicle-specific electron transport protein. It is an integral membrane protein that binds two heme groups non-covalently. This is a eukaryotic family. Members of the 'prokaryotic cytochrome b561' family can be found in Pfam: PF01292.
rpsblast_cdd gnl|CDD|176494 24 223 + 200 Gaps:9 92.99 214 35.68 6e-30 cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561). Cytochrome b(561) as found in non-vertebrate eumetazoans similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase catalyzing the reduction of Fe(3+) to Fe(2+) such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently and may have six alpha-helical trans-membrane segments.
rpsblast_cdd gnl|CDD|128911 51 176 + 126 Gaps:3 100.00 129 44.19 2e-24 smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain. Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue termed Dcytb is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.
rpsblast_cdd gnl|CDD|176489 51 176 + 126 Gaps:2 97.71 131 42.97 2e-19 cd08554 Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.
rpsblast_cdd gnl|CDD|176495 52 182 + 131 Gaps:6 88.24 153 38.52 2e-16 cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561) CYBRD1 gene product. Duodenal cytochrome b or ferric-chelate reductase 3 a cytochrome b(561) as found in vertebrates which might act as a ferric-chelate reductase catalyzing the reduction of Fe(3+) to Fe(2+) such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+) facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently and may have six alpha-helical trans-membrane segments.
rpsblast_cdd gnl|CDD|176492 19 182 + 164 Gaps:9 92.18 179 36.36 4e-15 cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561) CYBASC3 gene product. Cytochrome b ascorbate-dependent 3 as found in vertebrates which might act as a ferric-chelate reductase catalyzing the reduction of Fe(3+) to Fe(2+) such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently and may have six alpha-helical trans-membrane segments.

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 153 177 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 8 223 216 PTHR10106 none none none
Phobius 121 141 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 219 239 21 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 51 176 126 SM00665 none Cytochrome b-561 / ferric reductase transmembrane domain. IPR006593
Phobius 197 218 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 178 196 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 83 101 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 51 182 132 PF03188 none Eukaryotic cytochrome b561 IPR004877
Phobius 142 152 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 8 223 216 PTHR10106:SF0 none none none
Phobius 72 82 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 102 120 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 35 45 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 34 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 46 71 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 14 218 205 PS50939 none Cytochrome b561 domain profile. IPR006593

6 Localization

Analysis Start End Length
TMHMM 83 105 22
TMHMM 48 70 22
TMHMM 12 33 21
TMHMM 120 142 22
TMHMM 155 177 22
TMHMM 197 219 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 32   Secretory pathway 1 0.993 0.041 NON-PLANT 32