Protein : Qrob_P0038850.2 Q. robur
Protein Identifier  ? Qrob_P0038850.2 Organism . Name  Quercus robur
Score  23.3 Score Type  egn
Protein Description  (M=3) K02910 - large subunit ribosomal protein L31e Gene Prediction Quality  validated
Protein length 

Sequence

Length: 96  
Kegg Orthology  K02910
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005910 4 95 + 92 none 76.03 121 95.65 1e-55 Ribosomal protein L31e family protein
blastp_kegg lcl|vvi:100855296 4 95 + 92 none 76.03 121 91.30 5e-54 60S ribosomal protein L31-like
blastp_kegg lcl|fve:101291562 4 95 + 92 none 75.41 122 89.13 2e-53 60S ribosomal protein L31-like
blastp_kegg lcl|cit:102625183 4 95 + 92 none 76.03 121 92.39 7e-53 60S ribosomal protein L31-like
blastp_kegg lcl|atr:s00036p00185940 4 95 + 92 none 76.67 120 90.22 1e-52 AMTR_s00036p00185940 hypothetical protein
blastp_kegg lcl|cmo:103492289 4 95 + 92 none 76.67 120 90.22 1e-52 60S ribosomal protein L31
blastp_kegg lcl|cmo:103498384 4 95 + 92 none 76.67 120 90.22 1e-52 60S ribosomal protein L31
blastp_kegg lcl|csv:101222160 4 95 + 92 none 76.67 120 90.22 2e-52 60S ribosomal protein L31-like
blastp_kegg lcl|pper:PRUPE_ppa013450mg 4 95 + 92 none 76.03 121 88.04 4e-52 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0534300 4 95 + 92 none 77.31 119 89.13 4e-52 60S ribosomal protein L31 putative
blastp_pdb 2j37_6 4 95 + 92 none 74.80 123 88.04 5e-41 mol:protein length:123 RIBOSOMAL PROTEIN L31
blastp_pdb 2go5_6 4 95 + 92 none 74.80 123 88.04 5e-41 mol:protein length:123 ribosomal protein L31
blastp_pdb 3izr_g 4 95 + 92 none 74.80 123 84.78 1e-38 mol:protein length:123 60S ribosomal protein L31 (L31e)
blastp_pdb 2zkr_x 5 94 + 90 Gaps:2 70.40 125 55.68 5e-29 mol:protein length:125 60S Ribosomal protein L31
blastp_pdb 4a1e_W 4 88 + 85 Gaps:2 74.77 111 53.01 4e-26 mol:protein length:111 60S RIBOSOMAL PROTEIN L31
blastp_pdb 4a1c_W 4 88 + 85 Gaps:2 74.77 111 53.01 4e-26 mol:protein length:111 60S RIBOSOMAL PROTEIN L31
blastp_pdb 4a1a_W 4 88 + 85 Gaps:2 74.77 111 53.01 4e-26 mol:protein length:111 60S RIBOSOMAL PROTEIN L31
blastp_pdb 4a17_W 4 88 + 85 Gaps:2 74.77 111 53.01 4e-26 mol:protein length:111 60S RIBOSOMAL PROTEIN L31
blastp_pdb 3u5i_d 4 94 + 91 Gaps:2 78.76 113 52.81 2e-24 mol:protein length:113 60S ribosomal protein L31-A
blastp_pdb 3u5e_d 4 94 + 91 Gaps:2 78.76 113 52.81 2e-24 mol:protein length:113 60S ribosomal protein L31-A
blastp_uniprot_sprot sp|Q9M573|RL31_PERFR 4 95 + 92 none 76.03 121 89.13 3e-53 60S ribosomal protein L31 OS Perilla frutescens GN RPL31 PE 2 SV 1
blastp_uniprot_sprot sp|O65071|RL31_PICMA 4 95 + 92 none 76.67 120 85.87 3e-52 60S ribosomal protein L31 OS Picea mariana GN RPL31 PE 2 SV 1
blastp_uniprot_sprot sp|P51420|RL313_ARATH 4 95 + 92 none 77.31 119 86.96 5e-51 60S ribosomal protein L31-3 OS Arabidopsis thaliana GN RPL31C PE 2 SV 2
blastp_uniprot_sprot sp|Q9STR1|RL312_ARATH 4 95 + 92 none 77.31 119 84.78 4e-50 60S ribosomal protein L31-2 OS Arabidopsis thaliana GN RPL31B PE 3 SV 1
blastp_uniprot_sprot sp|Q9SLL7|RL311_ARATH 4 95 + 92 none 77.31 119 84.78 4e-49 60S ribosomal protein L31-1 OS Arabidopsis thaliana GN RPL31A PE 3 SV 1
blastp_uniprot_sprot sp|P46290|RL31_NICGU 4 95 + 92 none 76.67 120 88.04 2e-39 60S ribosomal protein L31 OS Nicotiana glutinosa GN RPL31 PE 1 SV 1
blastp_uniprot_sprot sp|Q9MAV7|RL31_PANGI 4 95 + 92 none 76.03 121 83.70 1e-35 60S ribosomal protein L31 OS Panax ginseng GN RPL31 PE 2 SV 1
blastp_uniprot_sprot sp|P45841|RL31_CHLRE 3 93 + 91 Gaps:2 76.72 116 65.17 1e-34 60S ribosomal protein L31 OS Chlamydomonas reinhardtii GN RPL31 PE 3 SV 1
blastp_uniprot_sprot sp|Q9XGL4|RL31_CYAPA 5 94 + 90 Gaps:2 73.95 119 65.91 3e-34 60S ribosomal protein L31 OS Cyanophora paradoxa GN RPL31 PE 3 SV 1
blastp_uniprot_sprot sp|Q90YT7|RL31_ICTPU 4 94 + 91 Gaps:2 71.20 125 56.18 2e-29 60S ribosomal protein L31 OS Ictalurus punctatus GN rpl31 PE 2 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 3 67 65 SSF54575 none none IPR023621
PANTHER 4 95 92 PTHR10956 none none IPR000054
ProSitePatterns 29 43 15 PS01144 none Ribosomal protein L31e signature. IPR020052
Gene3D 3 71 69 G3DSA:3.10.440.10 none none IPR023621
Pfam 4 68 65 PF01198 none Ribosomal protein L31e IPR000054
ProDom 4 39 36 PD006030 none RIBOSOMAL 60S L31 RIBONUCLEOPROTEIN L31E 50S L31 SUBUNIT STRAIN PHOSPHORYLATION IPR000054

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting