Protein : Qrob_P0038830.2 Q. robur
Protein Identifier  ? Qrob_P0038830.2 Organism . Name  Quercus robur
Score  72.1 Score Type  egn
Protein Description  (M=3) K02910 - large subunit ribosomal protein L31e Gene Prediction Quality  validated
Protein length 

Sequence

Length: 122  
Kegg Orthology  K02910
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005910 1 121 + 121 none 100.00 121 95.04 4e-77 Ribosomal protein L31e family protein
blastp_kegg lcl|vvi:100855296 1 121 + 121 none 100.00 121 89.26 4e-74 60S ribosomal protein L31-like
blastp_kegg lcl|cit:102625183 1 121 + 121 none 100.00 121 91.74 6e-74 60S ribosomal protein L31-like
blastp_kegg lcl|pmum:103330496 1 121 + 121 none 100.00 121 89.26 2e-73 60S ribosomal protein L31
blastp_kegg lcl|pper:PRUPE_ppa013450mg 1 121 + 121 none 100.00 121 88.43 5e-73 hypothetical protein
blastp_kegg lcl|fve:101291562 4 121 + 118 none 96.72 122 89.83 2e-72 60S ribosomal protein L31-like
blastp_kegg lcl|cmo:103492289 1 121 + 121 Gaps:1 100.00 120 90.00 3e-71 60S ribosomal protein L31
blastp_kegg lcl|cmo:103498384 1 121 + 121 Gaps:1 100.00 120 90.00 3e-71 60S ribosomal protein L31
blastp_kegg lcl|csv:101222160 1 121 + 121 Gaps:1 100.00 120 90.00 4e-71 60S ribosomal protein L31-like
blastp_kegg lcl|vvi:100267870 1 121 + 121 Gaps:1 100.00 120 90.00 5e-71 60S ribosomal protein L31-like
blastp_pdb 2j37_6 9 121 + 113 none 91.87 123 88.50 3e-57 mol:protein length:123 RIBOSOMAL PROTEIN L31
blastp_pdb 2go5_6 9 121 + 113 none 91.87 123 88.50 3e-57 mol:protein length:123 ribosomal protein L31
blastp_pdb 3izr_g 4 121 + 118 none 95.93 123 83.90 6e-56 mol:protein length:123 60S ribosomal protein L31 (L31e)
blastp_pdb 2zkr_x 11 120 + 110 Gaps:2 86.40 125 59.26 2e-41 mol:protein length:125 60S Ribosomal protein L31
blastp_pdb 3u5i_d 12 120 + 109 Gaps:2 94.69 113 58.88 2e-37 mol:protein length:113 60S ribosomal protein L31-A
blastp_pdb 3u5e_d 12 120 + 109 Gaps:2 94.69 113 58.88 2e-37 mol:protein length:113 60S ribosomal protein L31-A
blastp_pdb 3o5h_a 12 120 + 109 Gaps:2 94.69 113 58.88 2e-37 mol:protein length:113 60S ribosomal protein L31-A
blastp_pdb 3o58_a 12 120 + 109 Gaps:2 94.69 113 58.88 2e-37 mol:protein length:113 60S ribosomal protein L31-A
blastp_pdb 3izs_g 12 120 + 109 Gaps:2 94.69 113 58.88 2e-37 mol:protein length:113 60S ribosomal protein rpL31 (L31e)
blastp_pdb 2wwb_M 12 120 + 109 Gaps:2 94.69 113 58.88 2e-37 mol:protein length:113 60S RIBOSOMAL PROTEIN L31-A
blastp_uniprot_sprot sp|Q9M573|RL31_PERFR 1 121 + 121 none 100.00 121 89.26 7e-74 60S ribosomal protein L31 OS Perilla frutescens GN RPL31 PE 2 SV 1
blastp_uniprot_sprot sp|O65071|RL31_PICMA 1 121 + 121 Gaps:1 100.00 120 84.17 2e-69 60S ribosomal protein L31 OS Picea mariana GN RPL31 PE 2 SV 1
blastp_uniprot_sprot sp|P51420|RL313_ARATH 7 121 + 115 none 96.64 119 86.96 6e-68 60S ribosomal protein L31-3 OS Arabidopsis thaliana GN RPL31C PE 2 SV 2
blastp_uniprot_sprot sp|Q9STR1|RL312_ARATH 7 121 + 115 none 96.64 119 86.09 2e-67 60S ribosomal protein L31-2 OS Arabidopsis thaliana GN RPL31B PE 3 SV 1
blastp_uniprot_sprot sp|Q9SLL7|RL311_ARATH 2 121 + 120 Gaps:1 100.00 119 84.87 1e-66 60S ribosomal protein L31-1 OS Arabidopsis thaliana GN RPL31A PE 3 SV 1
blastp_uniprot_sprot sp|P46290|RL31_NICGU 1 121 + 121 Gaps:1 100.00 120 88.33 7e-58 60S ribosomal protein L31 OS Nicotiana glutinosa GN RPL31 PE 1 SV 1
blastp_uniprot_sprot sp|Q9MAV7|RL31_PANGI 1 121 + 121 Gaps:1 99.17 121 85.83 6e-55 60S ribosomal protein L31 OS Panax ginseng GN RPL31 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XGL4|RL31_CYAPA 7 120 + 114 Gaps:2 94.12 119 67.86 2e-48 60S ribosomal protein L31 OS Cyanophora paradoxa GN RPL31 PE 3 SV 1
blastp_uniprot_sprot sp|P45841|RL31_CHLRE 7 119 + 113 Gaps:2 95.69 116 65.77 5e-45 60S ribosomal protein L31 OS Chlamydomonas reinhardtii GN RPL31 PE 3 SV 1
blastp_uniprot_sprot sp|Q90YT7|RL31_ICTPU 11 120 + 110 Gaps:2 86.40 125 60.19 8e-42 60S ribosomal protein L31 OS Ictalurus punctatus GN rpl31 PE 2 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 12 93 82 SSF54575 none none IPR023621
Pfam 11 93 83 PF01198 none Ribosomal protein L31e IPR000054
Gene3D 11 97 87 G3DSA:3.10.440.10 none none IPR023621
ProSitePatterns 55 69 15 PS01144 none Ribosomal protein L31e signature. IPR020052
PANTHER 1 121 121 PTHR10956 none none IPR000054
ProDom 4 65 62 PD006030 none RIBOSOMAL 60S L31 RIBONUCLEOPROTEIN L31E 50S L31 SUBUNIT STRAIN PHOSPHORYLATION IPR000054

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting