Protein : Qrob_P0038480.2 Q. robur
Protein Identifier  ? Qrob_P0038480.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) PTHR11389:SF394 - KRAB-RELATED C2H2-TYPE ZINC-FINGER PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 343  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100794446 1 339 + 339 Gaps:35 100.00 352 69.32 3e-158 protein TRANSPARENT TESTA 1-like
blastp_kegg lcl|tcc:TCM_005892 1 339 + 339 Gaps:26 100.00 331 70.69 2e-155 TRANSPARENT TESTA 1 protein putative
blastp_kegg lcl|gmx:100799060 1 339 + 339 Gaps:38 100.00 357 64.43 4e-152 protein TRANSPARENT TESTA 1-like
blastp_kegg lcl|pop:POPTR_0001s27490g 1 339 + 339 Gaps:32 100.00 335 71.94 1e-149 POPTRDRAFT_173240 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_005G020400g 1 339 + 339 Gaps:36 100.00 323 67.80 1e-148 hypothetical protein
blastp_kegg lcl|vvi:100255592 1 337 + 337 Gaps:34 99.42 345 66.18 1e-147 protein TRANSPARENT TESTA 1-like
blastp_kegg lcl|rcu:RCOM_0090910 1 337 + 337 Gaps:23 99.42 344 66.67 3e-147 TRANSPARENT TESTA 1 protein putative
blastp_kegg lcl|pop:POPTR_0009s06700g 1 339 + 339 Gaps:34 100.00 325 67.38 3e-147 POPTRDRAFT_202805 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_011G212900g 1 338 + 338 Gaps:14 99.71 343 68.13 5e-147 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1293650 1 337 + 337 Gaps:17 99.70 329 69.51 2e-146 TRANSPARENT TESTA 1 protein putative
blastp_uniprot_sprot sp|Q8VWG3|TT1_ARATH 114 323 + 210 Gaps:12 68.65 303 67.31 3e-96 Protein TRANSPARENT TESTA 1 OS Arabidopsis thaliana GN TT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C8N5|STOP1_ARATH 172 313 + 142 Gaps:12 29.66 499 41.89 1e-25 Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS Arabidopsis thaliana GN STOP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q943I6|STOP1_ORYSJ 172 313 + 142 Gaps:6 27.97 522 39.73 1e-24 Zinc finger protein STOP1 homolog OS Oryza sativa subsp. japonica GN Os01g0871200 PE 2 SV 1
blastp_uniprot_sprot sp|Q2QX40|ART1_ORYSJ 172 314 + 143 Gaps:9 32.26 465 39.33 2e-20 Zinc finger protein STAR3 OS Oryza sativa subsp. japonica GN STAR3 PE 2 SV 1
blastp_uniprot_sprot sp|Q700D2|JKD_ARATH 172 309 + 138 Gaps:9 26.04 503 38.93 2e-19 Zinc finger protein JACKDAW OS Arabidopsis thaliana GN JKD PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZWA6|MGP_ARATH 165 309 + 145 Gaps:12 27.08 506 39.42 2e-17 Zinc finger protein MAGPIE OS Arabidopsis thaliana GN MGP PE 1 SV 1
blastp_uniprot_sprot sp|Q9FFH3|NUC_ARATH 172 309 + 138 Gaps:10 27.90 466 36.92 2e-17 Zinc finger protein NUTCRACKER OS Arabidopsis thaliana GN NUC PE 2 SV 1
blastp_uniprot_sprot sp|Q6P9S1|ATMIN_MOUSE 225 313 + 89 Gaps:11 10.27 818 34.52 3e-09 ATM interactor OS Mus musculus GN Atmin PE 2 SV 2
blastp_uniprot_sprot sp|Q9ESP5|FEZF2_MOUSE 175 306 + 132 Gaps:35 29.67 455 35.56 7e-09 Fez family zinc finger protein 2 OS Mus musculus GN Fezf2 PE 2 SV 1
blastp_uniprot_sprot sp|Q2VWH6|FEZF2_BOVIN 175 306 + 132 Gaps:35 29.48 458 35.56 9e-09 Fez family zinc finger protein 2 OS Bos taurus GN FEZF2 PE 2 SV 2

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 178 197 20 G3DSA:3.30.160.60 none none IPR013087
SUPERFAMILY 171 200 30 SSF57667 none none none
Pfam 290 307 18 PF13894 none C2H2-type zinc finger none
Pfam 178 197 20 PF13894 none C2H2-type zinc finger none
PANTHER 220 308 89 PTHR11389:SF394 none none IPR029789
ProSiteProfiles 262 282 21 PS50157 none Zinc finger C2H2 type domain profile. IPR007087
Gene3D 258 282 25 G3DSA:3.30.160.60 none none IPR013087
ProSitePatterns 180 200 21 PS00028 none Zinc finger C2H2 type domain signature. IPR007087
PANTHER 25 114 90 PTHR11389:SF394 none none IPR029789
PANTHER 130 201 72 PTHR11389:SF394 none none IPR029789
SMART 178 200 23 SM00355 none zinc finger IPR015880
SMART 262 282 21 SM00355 none zinc finger IPR015880
PANTHER 220 308 89 PTHR11389 none none none
Pfam 262 284 23 PF00096 none Zinc finger, C2H2 type IPR007087
PANTHER 25 114 90 PTHR11389 none none none
PANTHER 130 201 72 PTHR11389 none none none
SUPERFAMILY 248 282 35 SSF57667 none none none
ProSiteProfiles 178 205 28 PS50157 none Zinc finger C2H2 type domain profile. IPR007087

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting