Protein : Qrob_P0035980.2 Q. robur
Protein Identifier  ? Qrob_P0035980.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR12561 - LIPOATE-PROTEIN LIGASE Alias (in v1)  Qrob_P0525830.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 195  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0006464 cellular protein modification process The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103931360 1 193 + 193 none 70.44 274 77.20 2e-110 putative lipoate-protein ligase A
blastp_kegg lcl|pper:PRUPE_ppa009955mg 1 193 + 193 Gaps:3 70.37 270 77.89 4e-108 hypothetical protein
blastp_kegg lcl|pxb:103958704 8 192 + 185 none 70.61 262 77.84 3e-107 putative lipoate-protein ligase A
blastp_kegg lcl|mdm:103437830 8 192 + 185 none 67.52 274 77.84 9e-107 putative lipoate-protein ligase A
blastp_kegg lcl|tcc:TCM_014047 8 191 + 184 none 71.04 259 78.80 1e-106 Biotin/lipoate A/B protein ligase family
blastp_kegg lcl|vvi:100245023 8 193 + 186 none 69.40 268 77.42 8e-106 probable lipoate-protein ligase A-like
blastp_kegg lcl|fve:101301137 8 191 + 184 none 69.17 266 78.26 1e-105 uncharacterized protein LOC101301137
blastp_kegg lcl|pmum:103338497 9 193 + 185 none 68.52 270 76.76 2e-105 putative lipoate-protein ligase A
blastp_kegg lcl|cmo:103486730 8 191 + 184 Gaps:1 67.53 271 78.69 2e-104 putative lipoate-protein ligase A
blastp_kegg lcl|rcu:RCOM_0340100 8 191 + 184 none 68.91 267 77.17 5e-104 lipoate-protein ligase putative
blastp_pdb 1vqz_A 53 179 + 127 Gaps:8 36.07 341 30.08 3e-08 mol:protein length:341 lipoate-protein ligase putative
blastp_pdb 3a7r_A 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 3a7a_C 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 3a7a_A 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2h_C 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2h_B 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2h_A 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2g_C 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2g_B 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_pdb 1x2g_A 31 179 + 149 Gaps:11 43.32 337 27.40 3e-07 mol:protein length:337 Lipoate-protein ligase A
blastp_uniprot_sprot sp|A4SQ09|LPLA_AERS4 28 179 + 152 Gaps:11 44.08 338 28.86 2e-08 Lipoate-protein ligase A OS Aeromonas salmonicida (strain A449) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|O07608|LPLJ_BACSU 53 172 + 120 Gaps:8 35.05 331 31.90 5e-08 Lipoate-protein ligase LplJ OS Bacillus subtilis (strain 168) GN lplJ PE 1 SV 1
blastp_uniprot_sprot sp|A1JPK8|LPLA_YERE8 31 179 + 149 Gaps:13 43.20 338 29.45 4e-07 Lipoate-protein ligase A OS Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|B7NW66|LPLA_ECO7I 31 179 + 149 Gaps:11 43.20 338 27.40 5e-07 Lipoate-protein ligase A OS Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|Q327K9|LPLA_SHIDS 31 179 + 149 Gaps:11 43.20 338 27.40 6e-07 Lipoate-protein ligase A OS Shigella dysenteriae serotype 1 (strain Sd197) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|Q8FA49|LPLA_ECOL6 31 179 + 149 Gaps:11 43.20 338 27.40 9e-07 Lipoate-protein ligase A OS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN lplA PE 3 SV 3
blastp_uniprot_sprot sp|Q31SV2|LPLA_SHIBS 31 179 + 149 Gaps:11 43.20 338 27.40 9e-07 Lipoate-protein ligase A OS Shigella boydii serotype 4 (strain Sb227) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|B2TZR8|LPLA_SHIB3 31 179 + 149 Gaps:11 43.20 338 27.40 9e-07 Lipoate-protein ligase A OS Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|B7LNS6|LPLA_ESCF3 31 179 + 149 Gaps:11 43.20 338 27.40 9e-07 Lipoate-protein ligase A OS Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN lplA PE 3 SV 1
blastp_uniprot_sprot sp|A0KMH0|LPLA_AERHH 28 179 + 152 Gaps:11 44.08 338 27.52 9e-07 Lipoate-protein ligase A OS Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN lplA PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 17 192 176 SSF55681 none none none
ProSiteProfiles 42 194 153 PS51733 "KEGG:00785+2.3.1.181","MetaCyc:PWY-6987","MetaCyc:PWY-7381" Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. IPR004143
Pfam 77 172 96 PF03099 "KEGG:00785+2.3.1.181","MetaCyc:PWY-6987","MetaCyc:PWY-7381" Biotin/lipoate A/B protein ligase family IPR004143
Gene3D 15 191 177 G3DSA:3.90.1550.10 none none none
PANTHER 14 193 180 PTHR12561 none none none

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting