Protein : Qrob_P0035650.2 Q. robur
Protein Identifier  ? Qrob_P0035650.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=24) K14484 - auxin-responsive protein IAA Gene Prediction Quality  validated
Protein length 

Sequence

Length: 198  
Kegg Orthology  K14484
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0909180 1 197 + 197 Gaps:6 100.00 191 82.72 6e-110 Auxin-responsive protein IAA4 putative
blastp_kegg lcl|vvi:100259648 1 197 + 197 Gaps:5 100.00 192 79.69 2e-109 auxin-induced protein 22D-like
blastp_kegg lcl|tcc:TCM_020770 1 197 + 197 Gaps:5 100.00 192 81.25 1e-108 AUX/IAA transcriptional regulator family protein
blastp_kegg lcl|pmum:103323940 1 197 + 197 Gaps:11 100.00 196 80.10 4e-102 auxin-induced protein IAA4-like
blastp_kegg lcl|pop:POPTR_0010s08890g 1 192 + 192 Gaps:2 64.65 297 80.73 7e-102 POPTRDRAFT_726443 hypothetical protein
blastp_kegg lcl|pop:POPTR_0008s16100g 1 197 + 197 Gaps:14 100.00 207 73.91 1e-101 POPTRDRAFT_564913 hypothetical protein
blastp_kegg lcl|tcc:TCM_026344 5 197 + 193 Gaps:5 100.00 192 76.56 2e-101 AUX/IAA transcriptional regulator family protein isoform 1
blastp_kegg lcl|pper:PRUPE_ppa018535mg 1 197 + 197 Gaps:11 100.00 196 79.59 2e-101 hypothetical protein
blastp_kegg lcl|cam:101512178 1 197 + 197 Gaps:16 100.00 183 80.33 3e-99 auxin-induced protein 22B-like
blastp_kegg lcl|gmx:100800212 1 197 + 197 Gaps:5 100.00 192 73.44 2e-96 auxin-induced protein 22B-like
blastp_uniprot_sprot sp|P32294|AX22B_VIGRR 1 197 + 197 Gaps:9 100.00 196 70.41 3e-94 Auxin-induced protein 22B OS Vigna radiata var. radiata GN AUX22B PE 2 SV 1
blastp_uniprot_sprot sp|O24542|AX22D_VIGRR 6 195 + 190 Gaps:6 96.37 193 72.04 2e-91 Auxin-induced protein 22D OS Vigna radiata var. radiata GN AUX22D PE 2 SV 1
blastp_uniprot_sprot sp|P33077|IAA4_ARATH 1 196 + 196 Gaps:14 98.92 186 72.83 5e-90 Auxin-responsive protein IAA4 OS Arabidopsis thaliana GN IAA4 PE 1 SV 2
blastp_uniprot_sprot sp|P49679|IAA4_PEA 11 197 + 187 Gaps:10 100.00 189 69.84 3e-88 Auxin-induced protein IAA4 OS Pisum sativum GN IAA4/5 PE 1 SV 1
blastp_uniprot_sprot sp|Q38822|IAA3_ARATH 11 197 + 187 Gaps:10 97.88 189 69.19 2e-87 Auxin-responsive protein IAA3 OS Arabidopsis thaliana GN IAA3 PE 1 SV 1
blastp_uniprot_sprot sp|O24543|AX22E_VIGRR 6 195 + 190 Gaps:10 98.52 203 64.50 4e-81 Auxin-induced protein 22E OS Vigna radiata var. radiata GN AUX22E PE 2 SV 1
blastp_uniprot_sprot sp|P49678|IAA2_ARATH 5 193 + 189 Gaps:25 97.70 174 71.18 9e-74 Auxin-responsive protein IAA2 OS Arabidopsis thaliana GN IAA2 PE 1 SV 3
blastp_uniprot_sprot sp|P49677|IAA1_ARATH 9 190 + 182 Gaps:24 95.24 168 73.75 4e-68 Auxin-responsive protein IAA1 OS Arabidopsis thaliana GN IAA1 PE 1 SV 2
blastp_uniprot_sprot sp|Q38832|IAA14_ARATH 11 193 + 183 Gaps:37 94.74 228 49.07 8e-54 Auxin-responsive protein IAA14 OS Arabidopsis thaliana GN IAA14 PE 1 SV 2
blastp_uniprot_sprot sp|P0C133|IAA31_ORYSJ 12 194 + 183 Gaps:32 96.95 197 56.02 3e-53 Auxin-responsive protein IAA31 OS Oryza sativa subsp. japonica GN IAA31 PE 2 SV 1
rpsblast_cdd gnl|CDD|202200 11 197 + 187 Gaps:11 100.00 188 59.57 2e-78 pfam02309 AUX_IAA AUX/IAA family. Transcription of the AUX/IAA family of genes is rapidly induced by the plant hormone auxin. Some members of this family are longer and contain an N terminal DNA binding domain. The function of this region is uncertain.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 100 187 88 PS51745 none PB1 domain profile. IPR000270
Pfam 11 195 185 PF02309 none AUX/IAA family IPR003311
PANTHER 6 195 190 PTHR31734:SF8 none none none
PANTHER 6 195 190 PTHR31734 none none none
SUPERFAMILY 95 186 92 SSF54277 none none none

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting