Protein : Qrob_P0035580.2 Q. robur
Protein Identifier  ? Qrob_P0035580.2 Organism . Name  Quercus robur
Score  38.4 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 249  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103931240 1 248 + 248 Gaps:33 100.00 221 67.87 3e-94 uncharacterized LOC103931240
blastp_kegg lcl|tcc:TCM_020763 6 248 + 243 Gaps:25 96.04 227 66.51 4e-94 NAD(P)H dehydrogenase 18
blastp_kegg lcl|pmum:103323947 1 248 + 248 Gaps:33 100.00 219 68.49 1e-93 uncharacterized LOC103323947
blastp_kegg lcl|pper:PRUPE_ppa011212mg 1 248 + 248 Gaps:33 100.00 219 68.49 1e-93 hypothetical protein
blastp_kegg lcl|pxb:103959001 1 248 + 248 Gaps:33 100.00 221 67.42 4e-93 uncharacterized LOC103959001
blastp_kegg lcl|mdm:103429944 1 248 + 248 Gaps:33 100.00 221 66.52 8e-93 uncharacterized LOC103429944
blastp_kegg lcl|mdm:103429917 1 248 + 248 Gaps:33 100.00 221 66.52 8e-93 uncharacterized LOC103429917
blastp_kegg lcl|mdm:103412813 1 248 + 248 Gaps:33 100.00 221 66.52 2e-92 uncharacterized LOC103412813
blastp_kegg lcl|csv:101219293 1 245 + 245 Gaps:32 98.66 224 65.16 9e-92 uncharacterized LOC101219293
blastp_kegg lcl|cmo:103483655 8 245 + 238 Gaps:31 97.31 223 65.90 3e-89 uncharacterized LOC103483655

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 191 248 58 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 112 138 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 139 157 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 158 190 33 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 111 111 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 168 190 22

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting