Protein : Qrob_P0031880.2 Q. robur
Protein Identifier  ? Qrob_P0031880.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=13) PTHR10024:SF201 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN (PTHR10024:SF201) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 360  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa018242mg 4 359 + 356 Gaps:50 50.91 766 53.59 2e-125 hypothetical protein
blastp_kegg lcl|pmum:103325735 4 359 + 356 Gaps:50 50.91 766 53.33 6e-125 multiple C2 and transmembrane domain-containing protein 2-like
blastp_kegg lcl|mdm:103444006 5 359 + 355 Gaps:52 50.65 768 51.41 4e-119 uncharacterized LOC103444006
blastp_kegg lcl|pxb:103964296 5 359 + 355 Gaps:52 50.65 768 51.16 2e-118 multiple C2 and transmembrane domain-containing protein 1-like
blastp_kegg lcl|pda:103705378 4 359 + 356 Gaps:54 51.03 776 47.22 8e-111 extended synaptotagmin-1-like
blastp_kegg lcl|pda:103702299 6 359 + 354 Gaps:54 50.84 775 47.21 9e-111 multiple C2 and transmembrane domain-containing protein 2-like
blastp_kegg lcl|eus:EUTSA_v10012747mg 1 359 + 359 Gaps:46 51.89 769 45.11 2e-110 hypothetical protein
blastp_kegg lcl|cit:102615790 7 359 + 353 Gaps:45 50.78 772 45.15 1e-109 multiple C2 and transmembrane domain-containing protein 2-like
blastp_kegg lcl|ath:AT5G12970 1 359 + 359 Gaps:46 51.89 769 44.61 2e-109 calcium-dependent lipid-binding domain-containing plant phosphoribosyltransferase-like protein
blastp_kegg lcl|csv:101227348 4 359 + 356 Gaps:46 51.16 774 47.22 7e-109 multiple C2 and transmembrane domain-containing protein 2-like
rpsblast_cdd gnl|CDD|175986 162 313 + 152 Gaps:3 99.33 150 48.32 2e-45 cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence four C2 domains two transmembrane regions (TMRs) and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region the others being synaptotagmins extended synaptotagmins and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. This cd contains the third C2 repeat C2C and has a type-II topology.
rpsblast_cdd gnl|CDD|176024 38 138 + 101 Gaps:28 100.00 121 39.67 4e-28 cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence four C2 domains two transmembrane regions (TMRs) and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region the others being synaptotagmins extended synaptotagmins and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. This cd contains the second C2 repeat C2B and has a type-II topology.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 161 262 102 SM00239 none Protein kinase C conserved region 2 (CalB) IPR000008
SMART 38 152 115 SM00239 none Protein kinase C conserved region 2 (CalB) IPR000008
SUPERFAMILY 38 154 117 SSF49562 none none IPR000008
Pfam 326 355 30 PF00168 none C2 domain IPR000008
Pfam 162 237 76 PF00168 none C2 domain IPR000008
Pfam 39 85 47 PF00168 none C2 domain IPR000008
SUPERFAMILY 161 315 155 SSF49562 none none IPR000008
PANTHER 74 359 286 PTHR10024 none none none
Gene3D 161 276 116 G3DSA:2.60.40.150 none none IPR000008
ProSiteProfiles 37 194 158 PS50004 none C2 domain profile. IPR000008
Gene3D 32 85 54 G3DSA:2.60.40.150 none none IPR000008
PANTHER 74 359 286 PTHR10024:SF201 none none none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting