Protein : Qrob_P0031850.2 Q. robur
Protein Identifier  ? Qrob_P0031850.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR11685:SF107 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED (PTHR11685:SF107) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 224  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s15230g 29 223 + 195 Gaps:30 42.06 535 62.67 3e-92 POPTRDRAFT_649070 hypothetical protein
blastp_kegg lcl|fve:101314644 29 219 + 191 Gaps:30 31.17 709 64.71 8e-90 uncharacterized protein LOC101314644
blastp_kegg lcl|pmum:103324350 29 220 + 192 Gaps:30 35.46 626 61.26 3e-88 uncharacterized LOC103324350
blastp_kegg lcl|pxb:103934300 29 223 + 195 Gaps:30 38.93 578 60.00 1e-87 uncharacterized LOC103934300
blastp_kegg lcl|mdm:103422866 29 223 + 195 Gaps:30 49.89 451 59.56 2e-87 uncharacterized LOC103422866
blastp_kegg lcl|tcc:TCM_041092 29 213 + 185 Gaps:30 39.45 545 61.86 5e-86 Zinc finger family protein putative
blastp_kegg lcl|mdm:103413046 29 223 + 195 Gaps:30 34.67 649 59.56 8e-86 uncharacterized LOC103413046
blastp_kegg lcl|pper:PRUPE_ppa025188mg 29 213 + 185 Gaps:30 40.11 536 61.40 3e-85 hypothetical protein
blastp_kegg lcl|cmo:103501665 29 218 + 190 Gaps:32 40.81 544 59.46 7e-85 uncharacterized LOC103501665
blastp_kegg lcl|mdm:103434126 29 220 + 192 Gaps:30 36.16 614 58.11 2e-84 uncharacterized LOC103434126
rpsblast_kog gnl|CDD|37023 29 215 + 187 Gaps:37 54.17 384 39.42 5e-34 KOG1812 KOG1812 KOG1812 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 30 223 194 PTHR11685:SF107 none none none
SUPERFAMILY 30 104 75 SSF57850 none none none
PANTHER 30 223 194 PTHR11685 "UniPathway:UPA00143";signature_desc=RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING) none IPR031127
SMART 95 168 74 SM00647 none In Between Ring fingers IPR002867
Pfam 106 168 63 PF01485 none IBR domain IPR002867

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

0 Targeting