Protein : Qrob_P0031470.2 Q. robur
Protein Identifier  ? Qrob_P0031470.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PF00146//PF00346 - NADH dehydrogenase // Respiratory-chain NADH dehydrogenase, 49 Kd subunit Gene Prediction Quality  validated
Protein length 

Sequence

Length: 769  
Kegg Orthology  K05579
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO:0016651 oxidoreductase activity, acting on NAD(P)H Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0048038 quinone binding Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mtr:MTR_4g006100 1 751 + 751 Gaps:58 87.10 899 79.05 0.0 NAD(P)H-quinone oxidoreductase subunit H
blastp_kegg lcl|mtr:MTR_6g042200 1 629 + 629 Gaps:46 95.46 705 78.60 0.0 NAD(P)H-quinone oxidoreductase subunit H
blastp_kegg lcl|atr:s00456p00012010 1 502 + 502 Gaps:118 93.28 476 83.11 0.0 AMTR_s00456p00012010 hypothetical protein
blastp_kegg lcl|mtr:MTR_7g021700 1 751 + 751 Gaps:36 81.73 635 77.84 0.0 NAD(P)H-quinone oxidoreductase subunit
blastp_kegg lcl|pper:PrpeC_p078 1 341 + 341 Gaps:30 94.40 393 82.21 0.0 ndhH NADH-plastoquinone oxidoreductase subunit 7
blastp_kegg lcl|cit:4271145 1 341 + 341 Gaps:30 93.92 395 81.67 0.0 ndhH CisiCp079 NADH dehydrogenase subunit 7
blastp_kegg lcl|pmum:18668097 1 341 + 341 Gaps:30 94.40 393 82.21 0.0 ndhH CP95_p009 NADH-plastoquinone oxidoreductase subunit 7
blastp_kegg lcl|fve:10251589 1 341 + 341 Gaps:30 94.40 393 81.67 0.0 ndhH FvH4_C0111 NADH-plastoquinone oxidoreductase subunit 7
blastp_kegg lcl|rcu:RCOM_ORF00112 1 341 + 341 Gaps:28 94.37 391 81.03 0.0 ndhH NADH dehydrogenase subunit 7
blastp_kegg lcl|tcc:ThcaC_p068 1 341 + 341 Gaps:30 94.40 393 80.59 0.0 ndhH NADH-plastoquinone oxidoreductase subunit 7
blastp_pdb 3m9s_D 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3m9s_4 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3ias_V 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3ias_M 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3ias_D 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3ias_4 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3iam_D 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3iam_4 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3i9v_D 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_pdb 3i9v_4 2 341 + 340 Gaps:31 90.71 409 38.01 1e-73 mol:protein length:409 NADH-quinone oxidoreductase subunit 4
blastp_uniprot_sprot sp|Q09MC0|NDHH_CITSI 1 341 + 341 Gaps:30 93.92 395 81.67 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Citrus sinensis GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|Q09WW2|NDHH_MORIN 1 341 + 341 Gaps:30 94.40 393 81.94 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Morus indica GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|B1A990|NDHH_CARPA 1 341 + 341 Gaps:30 94.40 393 81.67 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Carica papaya GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|A1XGT5|NDHH_RANMC 1 341 + 341 Gaps:30 94.40 393 81.40 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Ranunculus macranthus GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|Q2L953|NDHH_GOSHI 1 341 + 341 Gaps:30 94.40 393 81.13 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Gossypium hirsutum GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|A0ZZ91|NDHH_GOSBA 1 341 + 341 Gaps:30 94.40 393 81.13 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Gossypium barbadense GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|B1NWK5|NDHH_MANES 1 341 + 341 Gaps:30 94.40 393 80.59 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Manihot esculenta GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|Q0ZIW2|NDHH_VITVI 1 341 + 341 Gaps:30 94.40 393 81.40 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Vitis vinifera GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|B8R4B1|NDHH_TRISU 1 341 + 341 Gaps:30 94.40 393 80.05 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Trifolium subterraneum GN ndhH PE 3 SV 1
blastp_uniprot_sprot sp|Q2VEC5|NDHH_SOLTU 1 341 + 341 Gaps:30 94.40 393 80.59 0.0 NAD(P)H-quinone oxidoreductase subunit H chloroplastic OS Solanum tuberosum GN ndhH PE 3 SV 1

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 396 411 16 PS00667 none Respiratory-chain NADH dehydrogenase subunit 1 signature 1. IPR018086
Phobius 634 653 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 350 350 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 541 554 14 PS00668 none Respiratory-chain NADH dehydrogenase subunit 1 signature 2. IPR018086
Phobius 351 375 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 339 679 341 PTHR11432 none none IPR001694
Phobius 600 610 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 672 768 97 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 654 671 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 572 599 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 1 341 341 SSF56762 none none IPR029014
Phobius 473 571 99 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 278 341 64 PF00346 none Respiratory-chain NADH dehydrogenase, 49 Kd subunit IPR001135
Pfam 103 273 171 PF00346 none Respiratory-chain NADH dehydrogenase, 49 Kd subunit IPR001135
Phobius 442 446 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 422 441 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Hamap 350 673 324 MF_01350 none NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. IPR001694
Phobius 611 633 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 447 472 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 339 679 341 PTHR11432:SF5 none none none
Phobius 376 421 46 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSitePatterns 26 37 12 PS00535 none Respiratory chain NADH dehydrogenase 49 Kd subunit signature. IPR014029
Pfam 353 670 318 PF00146 none NADH dehydrogenase IPR001694
Gene3D 2 334 333 G3DSA:1.10.645.10 none none IPR029014

6 Localization

Analysis Start End Length
TMHMM 564 586 22
TMHMM 611 633 22
TMHMM 654 671 17
TMHMM 353 375 22
TMHMM 422 441 19
TMHMM 456 478 22

0 Qtllist

0 Targeting