Protein : Qrob_P0030840.2 Q. robur
Protein Identifier  ? Qrob_P0030840.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=1) PF01429//PF02791//PF05965 - Methyl-CpG binding domain // DDT domain // F/Y rich C-terminus Code Enzyme  EC:2.3.1.48
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1121  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102609215 1 1099 + 1099 Gaps:112 52.35 2126 53.37 0.0 methyl-CpG-binding domain-containing protein 9-like
blastp_kegg lcl|cic:CICLE_v10030471mg 1 1099 + 1099 Gaps:112 54.83 2030 53.37 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0527670 317 1099 + 783 Gaps:57 45.37 1794 57.74 0.0 DNA binding protein putative
blastp_kegg lcl|vvi:100258715 305 1099 + 795 Gaps:47 40.49 2060 56.00 0.0 methyl-CpG-binding domain-containing protein 9-like
blastp_kegg lcl|sly:101248775 54 1099 + 1046 Gaps:119 48.40 2151 45.92 0.0 methyl-CpG-binding domain-containing protein 9-like
blastp_kegg lcl|sot:102596413 54 1099 + 1046 Gaps:130 48.14 2173 45.60 0.0 methyl-CpG-binding domain-containing protein 9-like
blastp_kegg lcl|pda:103699157 50 1099 + 1050 Gaps:120 49.82 2256 44.40 0.0 methyl-CpG-binding domain-containing protein 9-like
blastp_kegg lcl|gmx:100820223 53 1102 + 1050 Gaps:152 48.96 2202 43.69 0.0 methyl-CpG-binding domain-containing protein 9-like
blastp_kegg lcl|cam:101489788 49 1102 + 1054 Gaps:139 49.77 2192 43.08 0.0 methyl-CpG-binding domain-containing protein 9-like
blastp_kegg lcl|mus:103977968 209 1099 + 891 Gaps:101 43.24 2225 43.45 0.0 methyl-CpG-binding domain-containing protein 9
blastp_uniprot_sprot sp|Q9SGH2|MBD9_ARATH 49 1099 + 1051 Gaps:66 47.06 2176 46.00 3e-121 Methyl-CpG-binding domain-containing protein 9 OS Arabidopsis thaliana GN MBD9 PE 2 SV 1
rpsblast_kog gnl|CDD|37135 19 74 + 56 Gaps:5 5.54 1102 36.07 9e-07 KOG1924 KOG1924 KOG1924 RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms Cytoskeleton].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 531 617 87 PS51543 none FYR domain FYRC motif profile. IPR003889
Pfam 175 245 71 PF01429 none Methyl-CpG binding domain IPR001739
SUPERFAMILY 176 224 49 SSF54171 none none IPR016177
SUPERFAMILY 1034 1097 64 SSF47370 none none IPR001487
Pfam 587 618 32 PF05965 none F/Y rich C-terminus IPR003889
ProSiteProfiles 683 747 65 PS50827 none DDT domain profile. IPR018501
Gene3D 182 228 47 G3DSA:3.30.890.10 none none IPR001739
Gene3D 987 1098 112 G3DSA:1.20.920.10 none none IPR001487
Gene3D 31 50 20 G3DSA:1.20.920.10 none none IPR001487
ProSiteProfiles 318 371 54 PS51542 none FYR domain FYRN motif profile. IPR003888
Pfam 684 744 61 PF02791 none DDT domain IPR004022

0 Localization

0 Qtllist

0 Targeting