Protein : Qrob_P0030120.2 Q. robur
Protein Identifier  ? Qrob_P0030120.2 Organism . Name  Quercus robur
Score  32.1 Score Type  egn
Protein Description  (M=3) K03512 - DNA polymerase lambda subunit [EC:2.7.7.7 4.2.99.-] Code Enzyme  EC:2.7.7.7
Gene Prediction Quality  validated Protein length 

Sequence

Length: 291  
Kegg Orthology  K03512
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0003887 DNA-directed DNA polymerase activity Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and a 3'hydroxyl group.
GO:0034061 DNA polymerase activity Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a nucleic acid template and a 3'hydroxyl group.
GO:0016779 nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0010s10490g 1 276 + 276 Gaps:102 72.83 508 54.05 2e-107 POPTRDRAFT_805058 DNA polymerase lambda family protein
blastp_kegg lcl|fve:101307784 1 276 + 276 Gaps:87 71.89 491 48.44 1e-91 DNA polymerase lambda-like
blastp_kegg lcl|vvi:100248348 1 276 + 276 Gaps:25 53.96 543 68.26 5e-74 DNA polymerase lambda-like
blastp_kegg lcl|pmum:103343270 1 276 + 276 Gaps:32 57.28 508 65.64 2e-71 DNA polymerase lambda
blastp_kegg lcl|pper:PRUPE_ppa018614mg 1 276 + 276 Gaps:25 56.69 501 68.31 1e-70 hypothetical protein
blastp_kegg lcl|mdm:103425492 1 276 + 276 Gaps:25 56.57 502 67.96 9e-70 DNA polymerase lambda-like
blastp_kegg lcl|csv:101231078 1 276 + 276 Gaps:27 74.50 400 64.77 3e-69 DNA polymerase lambda-like
blastp_kegg lcl|mtr:MTR_5g040170 16 276 + 261 Gaps:25 53.48 531 63.73 1e-68 DNA polymerase beta
blastp_kegg lcl|cam:101499677 1 276 + 276 Gaps:27 55.27 541 63.21 1e-68 DNA polymerase lambda-like
blastp_kegg lcl|sot:102604097 1 276 + 276 Gaps:27 52.64 530 67.74 1e-68 DNA polymerase lambda-like
blastp_pdb 3c5f_B 125 276 + 152 Gaps:23 51.04 335 32.75 8e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 3c5f_A 125 276 + 152 Gaps:23 51.04 335 32.75 8e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 3hwt_A 125 276 + 152 Gaps:23 51.04 335 32.75 9e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 3hw8_A 125 276 + 152 Gaps:23 51.04 335 32.75 9e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 2pfq_A 125 276 + 152 Gaps:23 51.04 335 32.75 9e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 2pfp_A 125 276 + 152 Gaps:23 51.04 335 32.75 9e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 2pfo_A 125 276 + 152 Gaps:23 51.04 335 32.75 9e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 2pfn_A 125 276 + 152 Gaps:23 51.04 335 32.75 9e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 1xsp_A 125 276 + 152 Gaps:23 51.04 335 32.75 9e-27 mol:protein length:335 DNA polymerase lambda
blastp_pdb 1xsn_A 125 276 + 152 Gaps:23 51.04 335 32.75 9e-27 mol:protein length:335 DNA polymerase lambda
blastp_uniprot_sprot sp|Q4R380|DPOLL_MACFA 125 276 + 152 Gaps:23 29.74 575 32.75 1e-25 DNA polymerase lambda OS Macaca fascicularis GN POLL PE 2 SV 1
blastp_uniprot_sprot sp|Q9UGP5|DPOLL_HUMAN 59 276 + 218 Gaps:32 41.39 575 30.25 1e-25 DNA polymerase lambda OS Homo sapiens GN POLL PE 1 SV 1
blastp_uniprot_sprot sp|Q8K409|DPOLB_MOUSE 132 288 + 157 Gaps:35 51.94 335 38.51 1e-24 DNA polymerase beta OS Mus musculus GN Polb PE 2 SV 3
blastp_uniprot_sprot sp|P06746|DPOLB_HUMAN 132 288 + 157 Gaps:35 51.94 335 39.08 2e-24 DNA polymerase beta OS Homo sapiens GN POLB PE 1 SV 3
blastp_uniprot_sprot sp|Q27958|DPOLB_BOVIN 132 288 + 157 Gaps:35 51.94 335 38.51 3e-24 DNA polymerase beta OS Bos taurus GN POLB PE 2 SV 3
blastp_uniprot_sprot sp|P06766|DPOLB_RAT 132 288 + 157 Gaps:31 51.94 335 37.93 4e-24 DNA polymerase beta OS Rattus norvegicus GN Polb PE 1 SV 4
blastp_uniprot_sprot sp|Q5RKI3|DPOLL_RAT 125 281 + 157 Gaps:23 30.72 573 31.25 8e-24 DNA polymerase lambda OS Rattus norvegicus GN Poll PE 2 SV 1
blastp_uniprot_sprot sp|O57383|DPOLB_XENLA 132 288 + 157 Gaps:31 52.10 334 38.51 3e-23 DNA polymerase beta OS Xenopus laevis GN polb PE 1 SV 3
blastp_uniprot_sprot sp|Q9QXE2|DPOLL_MOUSE 125 276 + 152 Gaps:23 29.84 573 32.16 3e-23 DNA polymerase lambda OS Mus musculus GN Poll PE 2 SV 1
blastp_uniprot_sprot sp|Q6DRD3|DPOLB_DANRE 132 271 + 140 Gaps:30 48.21 336 38.27 8e-22 DNA polymerase beta OS Danio rerio GN polb PE 2 SV 2

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 219 276 58 PF14792 none DNA polymerase beta palm IPR028207
Pfam 188 218 31 PF10391 none Fingers domain of DNA polymerase lambda IPR018944
SUPERFAMILY 206 275 70 SSF81301 none none none
PANTHER 13 273 261 PTHR11276 none none none
Gene3D 187 218 32 G3DSA:1.10.150.20 none none none
PANTHER 13 273 261 PTHR11276:SF1 none none none
SUPERFAMILY 9 109 101 SSF52113 none none IPR001357
ProSitePatterns 251 270 20 PS00522 none DNA polymerase family X signature. IPR019843
SUPERFAMILY 125 183 59 SSF47802 none none IPR010996
Gene3D 123 185 63 G3DSA:1.10.150.110 none none IPR027421
Gene3D 24 116 93 G3DSA:3.40.50.10190 none none IPR001357
SMART 107 287 181 SM00483 none DNA polymerase X family IPR002054
Gene3D 219 273 55 G3DSA:3.30.460.10 none none none
ProSiteProfiles 14 108 95 PS50172 none BRCT domain profile. IPR001357
Pfam 131 172 42 PF14716 none Helix-hairpin-helix domain none

0 Localization

0 Qtllist

0 Targeting