Protein : Qrob_P0029540.2 Q. robur
Protein Identifier  ? Qrob_P0029540.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=21) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED (PTHR11206:SF87) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 252  
Kegg Orthology  K03327
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020602mg 1 243 + 243 Gaps:83 85.79 380 42.94 2e-72 hypothetical protein
blastp_kegg lcl|pop:POPTR_0229s00240g 1 243 + 243 Gaps:83 70.56 462 44.48 3e-70 hypothetical protein
blastp_kegg lcl|sot:102601478 1 243 + 243 Gaps:102 71.88 480 42.32 1e-69 MATE efflux family protein 5-like
blastp_kegg lcl|cit:102617575 1 243 + 243 Gaps:102 73.88 467 41.45 2e-68 MATE efflux family protein 5-like
blastp_kegg lcl|tcc:TCM_019339 3 243 + 241 Gaps:102 71.91 477 41.98 2e-68 MATE efflux family protein putative
blastp_kegg lcl|sly:101255265 1 243 + 243 Gaps:102 71.88 480 41.74 1e-67 MATE efflux family protein 9-like
blastp_kegg lcl|gmx:100820480 1 243 + 243 Gaps:102 72.48 476 42.32 2e-67 MATE efflux family protein 5-like
blastp_kegg lcl|sot:102600472 1 243 + 243 Gaps:102 67.51 511 42.61 8e-67 MATE efflux family protein 9-like
blastp_kegg lcl|vvi:100242777 1 243 + 243 Gaps:102 69.84 494 43.19 5e-66 MATE efflux family protein 5-like
blastp_kegg lcl|pmum:103328689 1 243 + 243 Gaps:102 72.18 478 42.03 2e-65 MATE efflux family protein 5
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 1 243 + 243 Gaps:104 71.43 483 35.94 2e-53 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 1 243 + 243 Gaps:102 72.48 476 36.52 4e-52 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 1 243 + 243 Gaps:102 72.33 477 35.65 4e-52 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 1 243 + 243 Gaps:102 72.48 476 33.62 3e-44 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 1 243 + 243 Gaps:102 72.48 476 34.20 2e-42 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 1 243 + 243 Gaps:44 55.25 476 41.06 2e-31 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 1 151 + 151 Gaps:36 39.45 469 34.05 5e-18 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 1 151 + 151 Gaps:34 38.78 477 30.27 9e-15 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 1 238 + 238 Gaps:104 67.06 507 24.71 1e-14 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9UT92|YL47_SCHPO 4 83 + 80 none 15.01 533 32.50 3e-08 Uncharacterized transporter C323.07c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC323.07c PE 1 SV 1
rpsblast_cdd gnl|CDD|162043 1 151 + 151 Gaps:37 54.97 342 22.34 1e-10 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|190033 1 83 + 83 Gaps:1 52.17 161 32.14 3e-08 pfam01554 MatE MatE. The MatE domain.
rpsblast_kog gnl|CDD|36561 1 244 + 244 Gaps:46 57.29 473 39.85 4e-27 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 66 84 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 168 185 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 243 243 PTHR11206:SF87 none none none
Phobius 223 245 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 90 109 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 21 45 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 2 82 81 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 85 89 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 110 167 58 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 20 20 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 186 222 37 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 246 251 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 46 65 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 243 243 PTHR11206 none none none

6 Localization

Analysis Start End Length
TMHMM 21 43 22
TMHMM 87 109 22
TMHMM 223 245 22
TMHMM 58 80 22
TMHMM 124 146 22
TMHMM 167 184 17

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting