Protein : Qrob_P0028490.2 Q. robur
Protein Identifier  ? Qrob_P0028490.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=67) PF00010 - Helix-loop-helix DNA-binding domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 327  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0046983 protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s09210g 1 317 + 317 Gaps:48 98.06 360 51.84 2e-107 POPTRDRAFT_767688 basic helix-loop-helix family protein
blastp_kegg lcl|tcc:TCM_007220 1 326 + 326 Gaps:56 100.00 358 54.19 3e-104 Basic helix-loop-helix DNA-binding superfamily protein putative
blastp_kegg lcl|pop:POPTR_0001s30150g 1 325 + 325 Gaps:41 99.68 317 56.96 1e-100 POPTRDRAFT_798077 basic helix-loop-helix family protein
blastp_kegg lcl|rcu:RCOM_0175330 1 317 + 317 Gaps:29 97.97 296 60.00 1e-90 DNA binding protein putative
blastp_kegg lcl|pmum:103335135 1 326 + 326 Gaps:54 100.00 362 52.49 2e-87 transcription factor bHLH84
blastp_kegg lcl|pxb:103940730 1 326 + 326 Gaps:70 100.00 366 49.45 9e-85 transcription factor bHLH139-like
blastp_kegg lcl|mdm:103436366 1 326 + 326 Gaps:69 100.00 363 47.93 2e-83 transcription factor bHLH85-like
blastp_kegg lcl|vvi:100254852 1 325 + 325 Gaps:94 100.00 345 52.17 1e-75 transcription factor bHLH84-like
blastp_kegg lcl|fve:101314434 1 322 + 322 Gaps:57 98.81 337 51.05 8e-75 transcription factor bHLH85-like
blastp_kegg lcl|vvi:100264335 1 316 + 316 Gaps:57 97.11 380 44.72 2e-73 transcription factor bHLH84-like
blastp_uniprot_sprot sp|Q7XHI9|BH084_ARATH 10 325 + 316 Gaps:44 98.78 328 43.83 7e-54 Transcription factor bHLH84 OS Arabidopsis thaliana GN BHLH84 PE 2 SV 1
blastp_uniprot_sprot sp|Q84WK0|BH085_ARATH 10 316 + 307 Gaps:75 97.73 352 42.15 6e-51 Transcription factor bHLH85 OS Arabidopsis thaliana GN BHLH85 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LEG1|BH054_ARATH 169 316 + 148 Gaps:18 50.39 258 65.38 8e-44 Transcription factor bHLH54 OS Arabidopsis thaliana GN BHLH54 PE 2 SV 1
blastp_uniprot_sprot sp|Q3E7L7|BH139_ARATH 194 316 + 123 Gaps:11 50.22 223 65.18 1e-36 Transcription factor bHLH139 OS Arabidopsis thaliana GN BHLH139 PE 4 SV 1
blastp_uniprot_sprot sp|Q9FJ00|BH086_ARATH 231 302 + 72 Gaps:1 23.78 307 61.64 1e-21 Putative transcription factor bHLH086 OS Arabidopsis thaliana GN BHLH86 PE 4 SV 2
blastp_uniprot_sprot sp|Q9C707|BH083_ARATH 230 302 + 73 Gaps:1 24.83 298 59.46 1e-21 Transcription factor bHLH83 OS Arabidopsis thaliana GN BHLH83 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUG9|BH066_ARATH 233 301 + 69 none 19.71 350 55.07 1e-16 Transcription factor bHLH66 OS Arabidopsis thaliana GN BHLH66 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S3D5|BH069_ARATH 216 301 + 86 Gaps:1 28.06 310 49.43 1e-16 Transcription factor bHLH69 OS Arabidopsis thaliana GN BHLH69 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LSQ3|BH082_ARATH 233 301 + 69 none 23.23 297 50.72 6e-15 Transcription factor bHLH82 OS Arabidopsis thaliana GN BHLH82 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S3D2|BH087_ARATH 241 296 + 56 none 15.01 373 58.93 1e-14 Transcription factor bHLH87 OS Arabidopsis thaliana GN BHLH87 PE 2 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 246 295 50 SM00353 none helix loop helix domain IPR011598
ProSiteProfiles 240 289 50 PS50888 none Myc-type, basic helix-loop-helix (bHLH) domain profile. IPR011598
PANTHER 168 318 151 PTHR16223 none none none
SUPERFAMILY 243 307 65 SSF47459 none none IPR011598
Pfam 250 290 41 PF00010 none Helix-loop-helix DNA-binding domain IPR011598
Gene3D 245 305 61 G3DSA:4.10.280.10 none none IPR011598
PANTHER 168 318 151 PTHR16223:SF18 none none none

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting