Protein : Qrob_P0020740.2 Q. robur
Protein Identifier  ? Qrob_P0020740.2 Organism . Name  Quercus robur
Protein Description  (M=20) K09286 - EREBP-like factor Alias (in v1)  Qrob_P0240870.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 380  
Kegg Orthology  K09286
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0005s16690g 1 379 + 379 Gaps:40 100.00 351 67.52 5e-132 POPTRDRAFT_801219 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1034530 1 379 + 379 Gaps:30 99.48 383 61.42 3e-128 DNA binding protein putative
blastp_kegg lcl|pxb:103962212 1 379 + 379 Gaps:65 100.00 356 66.01 6e-126 ethylene-responsive transcription factor RAP2-4-like
blastp_kegg lcl|pop:POPTR_0002s09480g 5 379 + 375 Gaps:37 100.00 344 64.53 4e-124 POPTRDRAFT_798748 AP2 domain-containing transcription factor family protein
blastp_kegg lcl|pmum:103319847 1 379 + 379 Gaps:64 100.00 377 65.52 1e-122 ethylene-responsive transcription factor RAP2-4
blastp_kegg lcl|pper:PRUPE_ppa007193mg 1 379 + 379 Gaps:67 100.00 378 66.93 2e-122 hypothetical protein
blastp_kegg lcl|vvi:100245515 1 379 + 379 Gaps:55 99.18 367 62.64 7e-121 ethylene-responsive transcription factor RAP2-4-like
blastp_kegg lcl|fve:101313895 3 379 + 377 Gaps:40 98.66 372 63.22 5e-120 ethylene-responsive transcription factor RAP2-4-like
blastp_kegg lcl|cmo:103487548 1 379 + 379 Gaps:32 100.00 363 60.61 3e-118 ethylene-responsive transcription factor RAP2-13-like
blastp_kegg lcl|pvu:PHAVU_009G029600g 1 377 + 377 Gaps:44 100.00 353 65.72 3e-118 hypothetical protein
blastp_pdb 1gcc_A 180 238 + 59 Gaps:1 95.24 63 70.00 2e-22 mol:protein length:63 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
blastp_pdb 3gcc_A 180 238 + 59 Gaps:1 85.71 70 70.00 7e-22 mol:protein length:70 ATERF1
blastp_pdb 2gcc_A 180 238 + 59 Gaps:1 85.71 70 70.00 7e-22 mol:protein length:70 ATERF1
blastp_uniprot_sprot sp|Q8H1E4|RAP24_ARATH 1 379 + 379 Gaps:75 100.00 334 60.78 3e-96 Ethylene-responsive transcription factor RAP2-4 OS Arabidopsis thaliana GN RAP2-4 PE 1 SV 1
blastp_uniprot_sprot sp|O65665|ERF60_ARATH 109 377 + 269 Gaps:70 83.46 272 60.35 1e-65 Ethylene-responsive transcription factor ERF060 OS Arabidopsis thaliana GN ERF060 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LM15|RA213_ARATH 162 378 + 217 Gaps:36 73.95 261 63.73 5e-61 Ethylene-responsive transcription factor RAP2-13 OS Arabidopsis thaliana GN RAP2-13 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SKW5|ERF55_ARATH 20 379 + 360 Gaps:71 97.13 314 49.84 4e-60 Ethylene-responsive transcription factor ERF055 OS Arabidopsis thaliana GN ERF055 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIE4|ERF56_ARATH 110 377 + 268 Gaps:55 92.34 261 54.77 4e-57 Ethylene-responsive transcription factor ERF056 OS Arabidopsis thaliana GN ERF056 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJQ2|ERF57_ARATH 114 377 + 264 Gaps:48 79.42 277 55.91 2e-54 Ethylene-responsive transcription factor ERF057 OS Arabidopsis thaliana GN ERF057 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SVQ0|ERF62_ARATH 170 242 + 73 none 18.81 388 75.34 5e-33 Ethylene-responsive transcription factor ERF062 OS Arabidopsis thaliana GN ERF062 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKT1|ERF53_ARATH 175 240 + 66 none 19.64 336 81.82 2e-30 Ethylene-responsive transcription factor ERF053 OS Arabidopsis thaliana GN ERF053 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C7W2|ERF61_ARATH 173 294 + 122 Gaps:3 36.12 335 57.85 2e-28 Ethylene-responsive transcription factor ERF061 OS Arabidopsis thaliana GN ERF061 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M0J3|ERF54_ARATH 156 238 + 83 Gaps:5 29.45 292 65.12 1e-26 Ethylene-responsive transcription factor ERF054 OS Arabidopsis thaliana GN ERF054 PE 2 SV 1
rpsblast_cdd gnl|CDD|197689 182 244 + 63 none 98.44 64 71.43 9e-30 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 180 240 + 61 none 100.00 61 72.13 8e-26 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 182 230 + 49 Gaps:4 96.23 53 56.86 2e-14 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 22 379 358 PTHR31657 none none none
Coils 281 313 33 Coil none none none
ProSiteProfiles 181 238 58 PS51032 none AP2/ERF domain profile. IPR001471
PRINTS 182 193 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 204 220 17 PR00367 none Ethylene responsive element binding protein signature IPR001471
Gene3D 181 239 59 G3DSA:3.30.730.10 none none IPR001471
SMART 181 244 64 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
SUPERFAMILY 181 239 59 SSF54171 none none IPR016177
Pfam 181 230 50 PF00847 none AP2 domain IPR001471
PANTHER 22 379 358 PTHR31657:SF0 none none none

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting