Protein : Qrob_P0018830.2 Q. robur
Protein Identifier  ? Qrob_P0018830.2 Organism . Name  Quercus robur
Score  40.2 Score Type  egn
Protein Description  (M=1) PTHR11455//PTHR11455:SF12 - CRYPTOCHROME // SUBFAMILY NOT NAMED Code Enzyme  EC:4.1.99.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 533  
Kegg Orthology  K01669
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0003913 DNA photolyase activity Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103319988 20 532 + 513 Gaps:22 90.39 583 80.65 0.0 cryptochrome DASH chloroplastic/mitochondrial
blastp_kegg lcl|pxb:103953562 16 532 + 517 Gaps:22 90.65 588 79.74 0.0 cryptochrome DASH chloroplastic/mitochondrial
blastp_kegg lcl|fve:101308013 20 532 + 513 Gaps:25 98.29 527 80.50 0.0 cryptochrome DASH chloroplastic/mitochondrial-like
blastp_kegg lcl|cam:101500003 3 532 + 530 Gaps:22 92.05 591 74.08 0.0 cryptochrome DASH chloroplastic/mitochondrial-like
blastp_kegg lcl|gmx:100783312 1 532 + 532 Gaps:25 99.64 549 77.33 0.0 cryptochrome DASH chloroplastic/mitochondrial-like
blastp_kegg lcl|vvi:100252689 7 532 + 526 Gaps:22 98.36 549 76.11 0.0 cryptochrome DASH chloroplastic/mitochondrial-like
blastp_kegg lcl|tcc:TCM_036795 1 532 + 532 Gaps:28 92.78 582 75.19 0.0 DNA photolyase putative isoform 1
blastp_kegg lcl|pvu:PHAVU_009G100200g 1 532 + 532 Gaps:24 91.71 591 76.01 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa003875mg 20 532 + 513 Gaps:24 96.69 543 76.19 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0204960 22 532 + 511 Gaps:15 89.93 576 75.29 0.0 DNA photolyase putative (EC:4.1.99.3)
blastp_pdb 2vtb_F 20 530 + 511 Gaps:37 96.96 526 72.55 0.0 mol:protein length:526 CRYPTOCHROME DASH
blastp_pdb 2vtb_E 20 530 + 511 Gaps:37 96.96 526 72.55 0.0 mol:protein length:526 CRYPTOCHROME DASH
blastp_pdb 2vtb_D 20 530 + 511 Gaps:37 96.96 526 72.55 0.0 mol:protein length:526 CRYPTOCHROME DASH
blastp_pdb 2vtb_C 20 530 + 511 Gaps:37 96.96 526 72.55 0.0 mol:protein length:526 CRYPTOCHROME DASH
blastp_pdb 2vtb_A 20 530 + 511 Gaps:37 96.96 526 72.55 0.0 mol:protein length:526 CRYPTOCHROME DASH
blastp_pdb 2ijg_X 20 530 + 511 Gaps:37 96.96 526 72.55 0.0 mol:protein length:526 Cryptochrome DASH chloroplast/mitochondrial
blastp_pdb 2j4d_B 20 530 + 511 Gaps:37 97.14 525 72.55 0.0 mol:protein length:525 CRYPTOCHROME DASH
blastp_pdb 2j4d_A 20 530 + 511 Gaps:37 97.14 525 72.55 0.0 mol:protein length:525 CRYPTOCHROME DASH
blastp_pdb 2vtb_B 20 530 + 511 Gaps:38 96.95 525 72.50 0.0 mol:protein length:525 CRYPTOCHROME DASH
blastp_pdb 1np7_B 56 495 + 440 Gaps:38 89.98 489 50.91 1e-148 mol:protein length:489 DNA photolyase
blastp_uniprot_sprot sp|Q84KJ5|CRYD_ARATH 20 530 + 511 Gaps:37 89.63 569 72.55 0.0 Cryptochrome DASH chloroplastic/mitochondrial OS Arabidopsis thaliana GN CRYD PE 1 SV 2
blastp_uniprot_sprot sp|Q38JU2|CRYD_SOLLC 8 525 + 518 Gaps:23 92.72 577 66.73 0.0 Cryptochrome DASH chloroplastic/mitochondrial OS Solanum lycopersicum GN CRYD PE 3 SV 2
blastp_uniprot_sprot sp|Q651U1|CRYD_ORYSJ 23 525 + 503 Gaps:27 89.35 582 70.19 0.0 Cryptochrome DASH chloroplastic/mitochondrial OS Oryza sativa subsp. japonica GN CRYD PE 2 SV 1
blastp_uniprot_sprot sp|P77967|CRYD_SYNY3 56 495 + 440 Gaps:38 89.98 489 50.91 4e-148 Cryptochrome DASH OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN cry PE 1 SV 2
blastp_uniprot_sprot sp|Q4KML2|CRYD_DANRE 48 487 + 440 Gaps:34 84.62 520 49.55 4e-146 Cryptochrome DASH OS Danio rerio GN cry-dash PE 2 SV 2
blastp_uniprot_sprot sp|Q75WS4|CRYD_XENLA 58 487 + 430 Gaps:30 82.98 523 48.85 4e-140 Cryptochrome DASH OS Xenopus laevis GN cry-dash PE 2 SV 1
blastp_uniprot_sprot sp|Q7NMD1|CRYD_GLOVI 56 497 + 442 Gaps:30 88.40 500 48.64 6e-138 Cryptochrome DASH OS Gloeobacter violaceus (strain PCC 7421) GN cry PE 3 SV 1
blastp_uniprot_sprot sp|Q7UJB1|CRYD_RHOBA 55 497 + 443 Gaps:31 90.98 488 46.62 9e-133 Cryptochrome DASH OS Rhodopirellula baltica (strain SH1) GN cry PE 3 SV 2
blastp_uniprot_sprot sp|Q3IPX9|CRYD_NATPD 56 488 + 433 Gaps:31 91.14 474 47.45 7e-128 Cryptochrome DASH OS Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN cry PE 3 SV 1
blastp_uniprot_sprot sp|Q5IFN2|CRYD_OSTTA 53 488 + 436 Gaps:51 85.53 546 44.33 1e-117 Cryptochrome DASH chloroplastic/mitochondrial OS Ostreococcus tauri GN Ot01g06320 PE 3 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 56 483 428 TIGR02765 none crypto_DASH: cryptochrome, DASH family IPR014133
SUPERFAMILY 55 220 166 SSF52425 none none IPR006050
Gene3D 211 345 135 G3DSA:1.25.40.80 none none none
Gene3D 50 210 161 G3DSA:3.40.50.620 none none IPR014729
Pfam 282 490 209 PF03441 none FAD binding domain of DNA photolyase IPR005101
SUPERFAMILY 267 495 229 SSF48173 none none IPR005101
PRINTS 404 422 19 PR00147 none DNA photolyase signature IPR002081
PRINTS 443 457 15 PR00147 none DNA photolyase signature IPR002081
PRINTS 384 400 17 PR00147 none DNA photolyase signature IPR002081
PANTHER 12 492 481 PTHR11455:SF12 none none none
Gene3D 346 507 162 G3DSA:1.10.579.10 none none none
ProSiteProfiles 55 194 140 PS51645 none Photolyase/cryptochrome alpha/beta domain profile. IPR006050
PANTHER 12 492 481 PTHR11455 none none none
Pfam 58 218 161 PF00875 none DNA photolyase IPR006050

0 Localization

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 101   Mitochondrion 4 0.027 0.696 NON-PLANT 101