Protein : Qrob_P0018340.2 Q. robur
Protein Identifier  ? Qrob_P0018340.2 Organism . Name  Quercus robur
Score  88.0 Score Type  egn
Protein Description  (M=45) PF00892 - EamA-like transporter family Gene Prediction Quality  validated
Protein length 

Sequence

Length: 376  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101302163 1 375 + 375 Gaps:72 100.00 351 69.52 6e-156 auxin-induced protein 5NG4-like
blastp_kegg lcl|pper:PRUPE_ppa007800mg 1 375 + 375 Gaps:72 98.87 355 68.09 2e-155 hypothetical protein
blastp_kegg lcl|pmum:103337140 1 375 + 375 Gaps:72 98.87 355 68.09 7e-155 WAT1-related protein At5g47470-like
blastp_kegg lcl|pxb:103927326 4 374 + 371 Gaps:74 97.76 357 67.62 1e-154 WAT1-related protein At5g47470
blastp_kegg lcl|gmx:100809182 3 375 + 373 Gaps:75 95.65 368 66.48 3e-153 WAT1-related protein At5g47470-like
blastp_kegg lcl|mdm:103433009 4 375 + 372 Gaps:74 98.04 357 66.86 7e-152 WAT1-related protein At5g47470
blastp_kegg lcl|pop:POPTR_0003s07500g 5 375 + 371 Gaps:72 98.58 352 65.71 3e-145 POPTRDRAFT_757027 integral membrane family protein
blastp_kegg lcl|cam:101512454 4 375 + 372 Gaps:83 98.87 353 67.05 2e-144 WAT1-related protein At5g47470-like
blastp_kegg lcl|tcc:TCM_015959 4 365 + 362 Gaps:73 98.54 342 64.99 4e-142 Mtn21-like protein
blastp_kegg lcl|cmo:103490881 4 375 + 372 Gaps:75 100.00 351 61.82 5e-139 WAT1-related protein At5g47470
blastp_uniprot_sprot sp|Q9FGL0|WTR44_ARATH 2 375 + 374 Gaps:73 95.33 364 61.10 7e-133 WAT1-related protein At5g47470 OS Arabidopsis thaliana GN At5g47470 PE 3 SV 1
blastp_uniprot_sprot sp|F4JMI7|WTR34_ARATH 3 374 + 372 Gaps:96 99.72 359 48.60 9e-79 WAT1-related protein At4g16620 OS Arabidopsis thaliana GN At4g16620 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUS1|WTR13_ARATH 2 375 + 374 Gaps:84 91.58 380 29.60 4e-29 WAT1-related protein At2g37460 OS Arabidopsis thaliana GN At2g37460 PE 2 SV 1
blastp_uniprot_sprot sp|Q94AP3|WAT1_ARATH 5 355 + 351 Gaps:84 86.63 389 26.71 1e-26 Protein WALLS ARE THIN 1 OS Arabidopsis thaliana GN WAT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SUF1|WTR31_ARATH 18 364 + 347 Gaps:90 84.11 384 30.03 3e-26 WAT1-related protein At4g08290 OS Arabidopsis thaliana GN At4g08290 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FNA5|WTR39_ARATH 9 355 + 347 Gaps:83 86.47 377 29.75 1e-25 WAT1-related protein At5g13670 OS Arabidopsis thaliana GN At5g13670 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXB4|WTR2_ARATH 21 352 + 332 Gaps:90 83.42 374 33.01 3e-25 WAT1-related protein At1g09380 OS Arabidopsis thaliana GN At1g09380 PE 2 SV 1
blastp_uniprot_sprot sp|F4HZQ7|WTR5_ARATH 4 361 + 358 Gaps:83 88.17 389 28.57 1e-24 WAT1-related protein At1g21890 OS Arabidopsis thaliana GN At1g21890 PE 2 SV 1
blastp_uniprot_sprot sp|F4KHA8|WTR41_ARATH 10 374 + 365 Gaps:85 91.89 370 28.82 1e-24 WAT1-related protein At5g40230 OS Arabidopsis thaliana GN At5g40230 PE 3 SV 1
blastp_uniprot_sprot sp|O80638|WTR14_ARATH 18 373 + 356 Gaps:76 88.24 374 28.18 5e-24 WAT1-related protein At2g39510 OS Arabidopsis thaliana GN At2g39510 PE 2 SV 1
rpsblast_cdd gnl|CDD|177805 77 374 + 298 Gaps:61 70.67 358 30.83 4e-15 PLN00411 PLN00411 nodulin MtN21 family protein Provisional.

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 181 191 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 306 326 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 237 247 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 232 349 118 PF00892 none EamA-like transporter family IPR000620
Phobius 160 180 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 273 294 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 268 272 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 352 375 24 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 84 106 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 219 236 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 107 117 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 12 36 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 214 218 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 284 375 92 PTHR31218:SF14 none none none
PANTHER 1 235 235 PTHR31218:SF14 none none none
Phobius 248 267 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 65 83 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 118 140 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 192 213 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 141 159 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 43 64 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 284 375 92 PTHR31218 none none IPR030184
SUPERFAMILY 267 353 87 SSF103481 none none none
Phobius 295 305 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 235 235 PTHR31218 none none IPR030184
Phobius 327 331 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 37 42 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 332 351 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

11 Localization

Analysis Start End Length
TMHMM 161 180 19
TMHMM 42 64 22
TMHMM 276 298 22
TMHMM 332 351 19
TMHMM 219 237 18
TMHMM 119 141 22
TMHMM 305 327 22
TMHMM 187 209 22
TMHMM 84 106 22
TMHMM 244 266 22
TMHMM 13 35 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 37   Secretory pathway 4 0.828 0.024 NON-PLANT 37