Protein : Qrob_P0016550.2 Q. robur
Protein Identifier  ? Qrob_P0016550.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PF00301 - Rubredoxin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 198  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0005506 iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101292425 1 197 + 197 Gaps:2 100.00 197 73.60 3e-88 rubredoxin-like
blastp_kegg lcl|vvi:100259018 1 197 + 197 Gaps:5 100.00 200 76.00 7e-87 rubredoxin-like
blastp_kegg lcl|pmum:103318565 1 197 + 197 Gaps:18 100.00 209 74.16 3e-85 uncharacterized LOC103318565
blastp_kegg lcl|pper:PRUPE_ppa011413mg 1 197 + 197 Gaps:20 100.00 211 74.41 5e-85 hypothetical protein
blastp_kegg lcl|mdm:103434144 1 197 + 197 Gaps:24 100.00 219 68.04 4e-82 uncharacterized LOC103434144
blastp_kegg lcl|pxb:103954439 1 197 + 197 Gaps:16 100.00 207 71.50 2e-81 uncharacterized LOC103954439
blastp_kegg lcl|mdm:103413986 1 197 + 197 Gaps:16 100.00 207 70.53 5e-81 uncharacterized LOC103413986
blastp_kegg lcl|mdm:103451011 1 197 + 197 Gaps:16 100.00 207 70.53 5e-81 uncharacterized LOC103451011
blastp_kegg lcl|pop:POPTR_0005s05080g 1 197 + 197 Gaps:20 100.00 201 68.16 4e-80 rubredoxin family protein
blastp_kegg lcl|cmo:103499548 51 197 + 147 Gaps:1 73.27 202 80.41 1e-73 uncharacterized LOC103499548
blastp_pdb 2dsx_A 101 150 + 50 none 96.15 52 54.00 1e-13 mol:protein length:52 Rubredoxin
blastp_pdb 1rdg_A 101 150 + 50 none 96.15 52 54.00 1e-13 mol:protein length:52 RUBREDOXIN
blastp_pdb 1e8j_A 101 150 + 50 none 96.15 52 54.00 1e-13 mol:protein length:52 RUBREDOXIN
blastp_pdb 3ss2_A 104 148 + 45 none 83.33 54 57.78 3e-13 mol:protein length:54 Rubredoxin
blastp_pdb 3rzt_A 104 148 + 45 none 83.33 54 57.78 3e-13 mol:protein length:54 Rubredoxin
blastp_pdb 3rz6_A 104 148 + 45 none 83.33 54 57.78 3e-13 mol:protein length:54 Rubredoxin
blastp_pdb 3ryg_A 104 148 + 45 none 83.33 54 57.78 3e-13 mol:protein length:54 Rubredoxin
blastp_pdb 3kyy_A 104 148 + 45 none 83.33 54 57.78 3e-13 mol:protein length:54 Rubredoxin
blastp_pdb 3kyx_A 104 148 + 45 none 83.33 54 57.78 3e-13 mol:protein length:54 Rubredoxin
blastp_pdb 3kyw_A 104 148 + 45 none 83.33 54 57.78 3e-13 mol:protein length:54 Rubredoxin
blastp_uniprot_sprot sp|P73068|RUBR_SYNY3 85 196 + 112 Gaps:2 99.13 115 39.47 2e-22 Rubredoxin OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN rub PE 3 SV 1
blastp_uniprot_sprot sp|Q9XBL8|RUBR_ANAVT 95 197 + 103 Gaps:4 96.40 111 45.79 5e-21 Rubredoxin OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN rub PE 3 SV 1
blastp_uniprot_sprot sp|Q9WWN1|RUBR_NOSS1 95 197 + 103 Gaps:4 96.40 111 45.79 7e-21 Rubredoxin OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN rub PE 3 SV 2
blastp_uniprot_sprot sp|P0A4F1|RUBR4_RHOSQ 101 153 + 53 none 88.33 60 52.83 3e-13 Rubredoxin 4 OS Rhodococcus sp. (strain Q15) GN rubA4 PE 3 SV 1
blastp_uniprot_sprot sp|P0A4F0|RUBR4_RHOER 101 153 + 53 none 88.33 60 52.83 3e-13 Rubredoxin 4 OS Rhodococcus erythropolis GN rubA4 PE 3 SV 1
blastp_uniprot_sprot sp|P00270|RUBR_DESGI 101 150 + 50 none 96.15 52 54.00 4e-13 Rubredoxin OS Desulfovibrio gigas PE 1 SV 1
blastp_uniprot_sprot sp|P24297|RUBR_PYRFU 104 148 + 45 none 83.33 54 57.78 1e-12 Rubredoxin OS Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN rub PE 1 SV 2
blastp_uniprot_sprot sp|Q9V099|RUBR_PYRAB 102 148 + 47 none 88.68 53 55.32 2e-12 Rubredoxin OS Pyrococcus abyssi (strain GE5 / Orsay) GN rub PE 1 SV 1
blastp_uniprot_sprot sp|Q9AE63|RUBR2_RHOER 101 153 + 53 none 84.13 63 47.17 4e-12 Rubredoxin-2 OS Rhodococcus erythropolis GN rubA2 PE 3 SV 1
blastp_uniprot_sprot sp|P58025|RUBR3_CHLTE 104 151 + 48 none 90.57 53 58.33 8e-12 Rubredoxin 3 OS Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN rub3 PE 1 SV 2

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 197 197 1 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 131 141 11 PS00202 none Rubredoxin signature. IPR018527
SUPERFAMILY 98 164 67 SSF57802 none none none
ProSiteProfiles 99 150 52 PS50903 none Rubredoxin-like domain profile. IPR024934
Pfam 102 147 46 PF00301 none Rubredoxin IPR024935
Gene3D 98 151 54 G3DSA:2.20.28.10 none none IPR004039
Phobius 1 176 176 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 101 117 17 PR00163 none Rubredoxin signature IPR024935
PRINTS 131 147 17 PR00163 none Rubredoxin signature IPR024935
Phobius 177 196 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

1 Localization

Analysis Start End Length
TMHMM 177 196 19

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 19   Mitochondrion 4 0.031 0.703 NON-PLANT 19