Protein : Qrob_P0015400.2 Q. robur
Protein Identifier  ? Qrob_P0015400.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=3) 1.2.1.76 - Succinate-semialdehyde dehydrogenase (acetylating). Code Enzyme  EC:1.2.1.76
Gene Prediction Quality  validated Protein length 

Sequence

Length: 380  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101495566 5 338 + 334 Gaps:92 88.00 425 61.50 5e-138 succinate-semialdehyde dehydrogenase (acetylating)-like
blastp_kegg lcl|mtr:MTR_8g095220 62 338 + 277 Gaps:76 77.88 425 65.56 6e-136 Alcohol dehydrogenase-like protein
blastp_kegg lcl|gmx:100802431 5 338 + 334 Gaps:89 88.03 426 60.53 1e-135 alcohol dehydrogenase 1B-like
blastp_kegg lcl|gmx:100775182 62 338 + 277 Gaps:76 77.52 427 63.44 5e-131 alcohol dehydrogenase 1B-like
blastp_kegg lcl|pop:POPTR_0019s00830g 4 338 + 335 Gaps:88 88.51 444 55.73 7e-131 POPTRDRAFT_779964 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10028077mg 1 338 + 338 Gaps:94 88.52 427 56.08 2e-129 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_496551 1 324 + 324 Gaps:93 85.28 428 57.81 2e-129 oxidoreductase
blastp_kegg lcl|pop:POPTR_0004s14590g 4 338 + 335 Gaps:88 88.51 444 54.96 4e-129 hypothetical protein
blastp_kegg lcl|ath:AT5G63620 52 324 + 273 Gaps:78 77.05 427 62.01 1e-128 GroES-like zinc-binding alcohol dehydrogenase family protein
blastp_kegg lcl|mdm:103456131 67 338 + 272 Gaps:76 72.61 449 62.88 2e-128 alcohol dehydrogenase 1B
blastp_pdb 3pii_D 70 262 + 193 Gaps:42 46.31 339 40.76 1e-20 mol:protein length:339 Alcohol dehydrogenase
blastp_pdb 3pii_B 70 262 + 193 Gaps:42 46.31 339 40.76 1e-20 mol:protein length:339 Alcohol dehydrogenase
blastp_pdb 3pii_C 70 262 + 193 Gaps:42 46.31 339 40.76 1e-20 mol:protein length:339 Alcohol dehydrogenase
blastp_pdb 3pii_A 70 262 + 193 Gaps:42 46.31 339 40.76 1e-20 mol:protein length:339 Alcohol dehydrogenase
blastp_pdb 1rjw_D 70 262 + 193 Gaps:42 46.31 339 40.76 1e-20 mol:protein length:339 Alcohol dehydrogenase
blastp_pdb 1rjw_C 70 262 + 193 Gaps:42 46.31 339 40.76 1e-20 mol:protein length:339 Alcohol dehydrogenase
blastp_pdb 1rjw_B 70 262 + 193 Gaps:42 46.31 339 40.76 1e-20 mol:protein length:339 Alcohol dehydrogenase
blastp_pdb 1rjw_A 70 262 + 193 Gaps:42 46.31 339 40.76 1e-20 mol:protein length:339 Alcohol dehydrogenase
blastp_pdb 1cdo_B 71 267 + 197 Gaps:19 48.13 374 36.11 8e-20 mol:protein length:374 ALCOHOL DEHYDROGENASE
blastp_pdb 1cdo_A 71 267 + 197 Gaps:19 48.13 374 36.11 8e-20 mol:protein length:374 ALCOHOL DEHYDROGENASE
blastp_uniprot_sprot sp|A4YGN0|SUCD_METS5 70 268 + 199 Gaps:19 50.00 360 47.22 1e-39 Succinate-semialdehyde dehydrogenase (acetylating) OS Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN Msed_1424 PE 1 SV 1
blastp_uniprot_sprot sp|O53303|ADHD_MYCTU 72 283 + 212 Gaps:19 52.45 368 36.27 3e-22 Putative alcohol dehydrogenase D OS Mycobacterium tuberculosis GN adhD PE 2 SV 1
blastp_uniprot_sprot sp|P80175|ADHN_AMYME 71 265 + 195 Gaps:19 47.44 371 35.80 6e-22 NDMA-dependent alcohol dehydrogenase OS Amycolatopsis methanolica PE 1 SV 2
blastp_uniprot_sprot sp|P06757|ADH1_RAT 71 319 + 249 Gaps:37 57.98 376 37.16 1e-21 Alcohol dehydrogenase 1 OS Rattus norvegicus GN Adh1 PE 1 SV 3
blastp_uniprot_sprot sp|P25406|ADH1B_UROHA 71 267 + 197 Gaps:20 47.73 375 35.20 2e-21 Alcohol dehydrogenase 1B OS Uromastyx hardwickii PE 1 SV 2
blastp_uniprot_sprot sp|Q64413|ADH1_GEOBU 71 319 + 249 Gaps:38 57.87 375 36.41 2e-21 Alcohol dehydrogenase 1 OS Geomys bursarius GN ADH1 PE 2 SV 3
blastp_uniprot_sprot sp|P71818|ADHB_MYCTU 71 283 + 213 Gaps:24 51.47 375 36.79 3e-21 Alcohol dehydrogenase B OS Mycobacterium tuberculosis GN adhB PE 3 SV 2
blastp_uniprot_sprot sp|Q7U1B9|ADHB_MYCBO 71 283 + 213 Gaps:24 51.47 375 36.79 3e-21 Alcohol dehydrogenase B OS Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN adhB PE 3 SV 1
blastp_uniprot_sprot sp|P80467|ADHX_UROHA 71 267 + 197 Gaps:19 48.26 373 36.67 3e-21 Alcohol dehydrogenase class-3 OS Uromastyx hardwickii PE 1 SV 1
blastp_uniprot_sprot sp|P46415|ADHX_DROME 71 318 + 248 Gaps:41 57.26 379 38.25 3e-21 Alcohol dehydrogenase class-3 OS Drosophila melanogaster GN Fdh PE 1 SV 3

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 113 238 126 PF08240 none Alcohol dehydrogenase GroES-like domain IPR013154
Pfam 259 328 70 PF00107 none Zinc-binding dehydrogenase IPR013149
Gene3D 273 327 55 G3DSA:3.40.50.720 none none IPR016040
SUPERFAMILY 251 335 85 SSF51735 none none none
PANTHER 214 267 54 PTHR11695 none none IPR002085
PANTHER 64 188 125 PTHR11695 none none IPR002085
PANTHER 64 188 125 PTHR11695:SF280 none none none
PANTHER 214 267 54 PTHR11695:SF280 none none none
SUPERFAMILY 65 273 209 SSF50129 none none IPR011032
Gene3D 67 272 206 G3DSA:3.90.180.10 none none IPR011032

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 59   Mitochondrion 2 0.041 0.879 NON-PLANT 59