Protein : Qrob_P0013450.2 Q. robur
Protein Identifier  ? Qrob_P0013450.2 Organism . Name  Quercus robur
Score  75.0 Score Type  egn
Protein Description  (M=60) KOG0569 - Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 171  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_028773 20 169 + 150 Gaps:4 28.41 535 75.00 7e-65 Major facilitator superfamily protein isoform 1
blastp_kegg lcl|cit:102618273 38 169 + 132 Gaps:2 27.40 489 74.63 5e-64 probable plastidic glucose transporter 3-like
blastp_kegg lcl|pxb:103944852 38 169 + 132 none 27.10 487 76.52 1e-63 probable plastidic glucose transporter 3
blastp_kegg lcl|pxb:103930441 38 169 + 132 none 27.10 487 75.76 2e-62 probable plastidic glucose transporter 3
blastp_kegg lcl|mdm:103405446 38 169 + 132 none 27.10 487 75.76 2e-62 probable plastidic glucose transporter 3
blastp_kegg lcl|pmum:103327962 38 169 + 132 none 27.10 487 75.00 4e-62 probable plastidic glucose transporter 3
blastp_kegg lcl|rcu:RCOM_1493330 20 169 + 150 Gaps:6 32.12 467 71.33 2e-61 sugar transporter putative (EC:1.3.1.74)
blastp_kegg lcl|mdm:103421838 38 169 + 132 Gaps:1 26.95 486 76.34 3e-61 probable plastidic glucose transporter 3
blastp_kegg lcl|pper:PRUPE_ppa004915mg 38 169 + 132 Gaps:1 26.95 486 76.34 7e-61 hypothetical protein
blastp_kegg lcl|fve:101314002 38 169 + 132 none 27.27 484 73.48 2e-60 probable plastidic glucose transporter 3-like
blastp_uniprot_sprot sp|Q2V4B9|PLST3_ARATH 38 169 + 132 Gaps:7 26.06 495 73.64 6e-58 Probable plastidic glucose transporter 3 OS Arabidopsis thaliana GN At1g79820 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FYG3|PLST2_ARATH 38 167 + 130 Gaps:4 27.18 493 69.40 6e-51 Probable plastidic glucose transporter 2 OS Arabidopsis thaliana GN At1g67300 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WVE9|PLST1_ARATH 81 167 + 87 none 16.60 524 45.98 1e-19 Probable plastidic glucose transporter 1 OS Arabidopsis thaliana GN At1g05030 PE 2 SV 2
blastp_uniprot_sprot sp|Q56ZZ7|PLST4_ARATH 44 167 + 124 Gaps:5 21.79 546 41.18 3e-16 Plastidic glucose transporter 4 OS Arabidopsis thaliana GN At5g16150 PE 1 SV 2
blastp_uniprot_sprot sp|P30605|ITR1_YEAST 34 170 + 137 Gaps:13 23.97 584 31.43 1e-07 Myo-inositol transporter 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ITR1 PE 1 SV 2
blastp_uniprot_sprot sp|Q01440|GTR1_LEIDO 88 169 + 82 none 14.99 547 31.71 4e-07 Membrane transporter D1 OS Leishmania donovani PE 3 SV 1
blastp_uniprot_sprot sp|P46333|CSBC_BACSU 96 167 + 72 Gaps:2 15.18 461 45.71 2e-06 Probable metabolite transport protein CsbC OS Bacillus subtilis (strain 168) GN csbC PE 1 SV 3
blastp_uniprot_sprot sp|C0SPB2|YWTG_BACSU 97 166 + 70 Gaps:2 14.88 457 44.12 9e-06 Putative metabolite transport protein YwtG OS Bacillus subtilis (strain 168) GN ywtG PE 3 SV 1
rpsblast_cdd gnl|CDD|162084 58 167 + 110 Gaps:7 23.91 481 34.78 1e-09 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 89 167 + 79 Gaps:6 17.75 479 29.41 1e-08 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|200987 89 167 + 79 Gaps:9 19.60 449 34.09 5e-08 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_kog gnl|CDD|35789 88 169 + 82 Gaps:12 19.38 485 32.98 8e-08 KOG0569 KOG0569 KOG0569 Permease of the major facilitator superfamily [Carbohydrate transport and metabolism].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 87 170 84 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846
PANTHER 12 169 158 PTHR24063:SF283 none none none
PANTHER 12 169 158 PTHR24063 none none none
Gene3D 83 166 84 G3DSA:1.20.1250.20 none none none
Phobius 147 170 24 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 104 122 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 123 146 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 83 83 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 89 168 80 PF00083 none Sugar (and other) transporter IPR005828
ProSitePatterns 143 160 18 PS00216 none Sugar transport proteins signature 1. IPR005829
Phobius 84 103 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 78 167 90 SSF103473 none none IPR020846

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting