Protein : Qrob_P0013090.2 Q. robur
Protein Identifier  ? Qrob_P0013090.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=4) PTHR14255:SF1 - ATP-DEPENDENT PROTEASE Gene Prediction Quality  validated
Protein length 

Sequence

Length: 405  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1493990 1 404 + 404 Gaps:77 99.59 483 60.50 7e-177 hypothetical protein
blastp_kegg lcl|pmum:103327945 3 401 + 399 Gaps:76 99.16 479 62.53 6e-174 uncharacterized LOC103327945
blastp_kegg lcl|vvi:100266912 3 404 + 402 Gaps:75 99.17 481 60.80 1e-173 uncharacterized LOC100266912
blastp_kegg lcl|pper:PRUPE_ppa024737mg 3 404 + 402 Gaps:93 98.77 489 60.46 3e-169 hypothetical protein
blastp_kegg lcl|pxb:103957476 3 403 + 401 Gaps:77 98.95 475 58.72 4e-168 uncharacterized LOC103957476
blastp_kegg lcl|vvi:100267889 11 403 + 393 Gaps:78 98.12 478 60.34 5e-168 uncharacterized LOC100267889
blastp_kegg lcl|pmum:103320179 12 403 + 392 Gaps:78 97.06 476 59.52 7e-167 uncharacterized LOC103320179
blastp_kegg lcl|atr:s00109p00049700 1 403 + 403 Gaps:83 99.79 477 61.55 2e-166 AMTR_s00109p00049700 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa018715mg 3 400 + 398 Gaps:60 98.86 439 66.59 3e-166 hypothetical protein
blastp_kegg lcl|tcc:TCM_037147 12 403 + 392 Gaps:93 97.10 483 59.91 9e-166 Sulfite exporter TauE/SafE family protein

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 79 109 31 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 370 404 35 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 110 120 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 288 307 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 140 158 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 402 402 PTHR14255 none none none
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 349 369 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 15 23 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 193 231 39 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 14 14 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 254 264 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 24 29 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 159 192 34 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 265 287 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 232 253 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 402 402 PTHR14255:SF1 none none none
Phobius 121 139 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 84 189 106 PF01925 none Sulfite exporter TauE/SafE IPR002781
Pfam 239 379 141 PF01925 none Sulfite exporter TauE/SafE IPR002781
Phobius 30 78 49 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 308 337 30 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 338 348 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

7 Localization

Analysis Start End Length
TMHMM 308 330 22
TMHMM 169 191 22
TMHMM 83 105 22
TMHMM 10 29 19
TMHMM 265 287 22
SignalP_EUK 1 29 28
TMHMM 232 250 18

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 1 0.963 0.007 NON-PLANT 29