Protein : Qrob_P0011880.2 Q. robur
Protein Identifier  ? Qrob_P0011880.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=8) K14431 - transcription factor TGA Gene Prediction Quality  validated
Protein length 

Sequence

Length: 448  
Kegg Orthology  K14431
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0006351 transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100242879 1 447 + 447 Gaps:30 100.00 469 82.09 0.0 transcription factor HBP-1b(c1)-like
blastp_kegg lcl|cit:102607483 19 447 + 429 Gaps:26 100.00 453 79.91 0.0 transcription factor TGA6-like
blastp_kegg lcl|rcu:RCOM_1451970 7 447 + 441 Gaps:31 99.35 463 79.13 0.0 Transcription factor HBP-1b(c1) putative
blastp_kegg lcl|pvu:PHAVU_011G203400g 1 447 + 447 Gaps:32 100.00 467 75.80 0.0 hypothetical protein
blastp_kegg lcl|gmx:778190 1 447 + 447 Gaps:32 100.00 467 75.16 0.0 BZIP99 bZIP transcription factor bZIP99
blastp_kegg lcl|cam:101494117 1 447 + 447 Gaps:39 100.00 470 76.60 0.0 TGACG-sequence-specific DNA-binding protein TGA-2.1-like
blastp_kegg lcl|gmx:100101881 1 447 + 447 Gaps:35 100.00 468 74.36 0.0 BZIP98 transcription factor bZIP98
blastp_kegg lcl|pvu:PHAVU_007G003600g 19 447 + 429 Gaps:35 100.00 444 77.93 0.0 hypothetical protein
blastp_kegg lcl|mtr:MTR_8g040120 1 447 + 447 Gaps:41 100.00 466 75.75 0.0 TGA transcription factor
blastp_kegg lcl|pop:POPTR_0003s19410g 7 447 + 441 Gaps:65 99.38 487 72.11 0.0 POPTRDRAFT_712010 hypothetical protein
blastp_uniprot_sprot sp|O24160|TGA21_TOBAC 1 447 + 447 Gaps:30 99.34 456 65.12 0.0 TGACG-sequence-specific DNA-binding protein TGA-2.1 OS Nicotiana tabacum GN TGA21 PE 1 SV 1
blastp_uniprot_sprot sp|Q41558|HBP1C_WHEAT 38 447 + 410 Gaps:34 92.86 476 66.74 0.0 Transcription factor HBP-1b(c1) (Fragment) OS Triticum aestivum PE 1 SV 2
blastp_uniprot_sprot sp|P23923|HBP1B_WHEAT 141 447 + 307 Gaps:27 100.00 332 77.71 3e-173 Transcription factor HBP-1b(c38) OS Triticum aestivum PE 2 SV 1
blastp_uniprot_sprot sp|Q39140|TGA6_ARATH 141 447 + 307 Gaps:25 100.00 330 77.27 1e-172 Transcription factor TGA6 OS Arabidopsis thaliana GN TGA6 PE 1 SV 2
blastp_uniprot_sprot sp|P43273|TGA2_ARATH 151 447 + 297 Gaps:1 89.70 330 83.11 7e-170 Transcription factor TGA2 OS Arabidopsis thaliana GN TGA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q39163|TGA5_ARATH 141 447 + 307 Gaps:25 100.00 330 75.76 1e-166 Transcription factor TGA5 OS Arabidopsis thaliana GN TGA5 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SX27|PAN_ARATH 148 447 + 300 Gaps:3 66.59 452 70.43 5e-143 Transcription factor PERIANTHIA OS Arabidopsis thaliana GN PAN PE 1 SV 1
blastp_uniprot_sprot sp|Q39162|TGA4_ARATH 165 447 + 283 Gaps:11 76.92 364 63.21 4e-115 Transcription factor TGA4 OS Arabidopsis thaliana GN TGA4 PE 1 SV 2
blastp_uniprot_sprot sp|Q39234|TGA3_ARATH 143 447 + 305 Gaps:11 78.65 384 59.93 4e-113 Transcription factor TGA3 OS Arabidopsis thaliana GN TGA3 PE 1 SV 1
blastp_uniprot_sprot sp|Q93ZE2|TGA7_ARATH 151 447 + 297 Gaps:14 77.99 368 60.98 1e-109 Transcription factor TGA7 OS Arabidopsis thaliana GN TGA7 PE 1 SV 1
rpsblast_cdd gnl|CDD|206313 243 321 + 79 none 100.00 79 74.68 1e-35 pfam14144 DOG1 Seed dormancy control. This family of plant proteins appears to be a highly specific controller seed dormancy.
rpsblast_cdd gnl|CDD|197664 161 204 + 44 none 67.69 65 40.91 6e-07 smart00338 BRLZ basic region leucin zipper.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 91 447 357 PTHR22952:SF94 none none none
ProSitePatterns 165 180 16 PS00036 none Basic-leucine zipper (bZIP) domain signature. IPR004827
PANTHER 91 447 357 PTHR22952 none none none
Gene3D 155 205 51 G3DSA:1.20.5.170 none none none
SMART 155 221 67 SM00338 none basic region leucin zipper IPR004827
Pfam 243 321 79 PF14144 none Seed dormancy control IPR025422
SUPERFAMILY 162 205 44 SSF57959 none none none
Coils 238 259 22 Coil none none none
ProSiteProfiles 160 204 45 PS50217 none Basic-leucine zipper (bZIP) domain profile. IPR004827
Pfam 161 202 42 PF00170 none bZIP transcription factor IPR004827
Coils 181 209 29 Coil none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting