Protein : Qrob_P0011340.2 Q. robur
Protein Identifier  ? Qrob_P0011340.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) 1.17.1.2 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. Code Enzyme  EC:1.17.1.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 390  
Kegg Orthology  K03527
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.
GO:0050992 dimethylallyl diphosphate biosynthetic process The chemical reactions and pathways resulting in the formation of dimethylallyl diphosphate.
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity Catalysis of the reaction: (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + NAD(P)H + H+ = isopentenyl diphosphate + NAD(P)+ + H2O. Note that (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate is an alternative name for 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s11480g 13 388 + 376 Gaps:42 87.83 460 77.48 0.0 POPTRDRAFT_557296 chloroplast biogenesis family protein
blastp_kegg lcl|gmx:100818067 7 389 + 383 Gaps:43 89.18 462 74.76 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_kegg lcl|cmo:103495189 13 389 + 377 Gaps:42 87.47 463 76.79 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0938310 13 388 + 376 Gaps:42 86.70 466 75.99 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase putative (EC:1.17.1.2)
blastp_kegg lcl|csv:101212295 39 388 + 350 Gaps:40 81.21 463 80.85 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_kegg lcl|mdm:103420733 39 389 + 351 Gaps:40 81.96 460 79.31 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_kegg lcl|gmx:100805941 7 389 + 383 Gaps:43 89.18 462 73.54 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_kegg lcl|pmum:103335515 39 388 + 350 Gaps:40 81.56 461 78.72 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic
blastp_kegg lcl|vvi:100267479 13 388 + 376 Gaps:42 86.88 465 74.75 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
blastp_kegg lcl|pxb:103962553 39 388 + 350 Gaps:40 98.43 382 78.46 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_pdb 3dnf_B 60 380 + 321 Gaps:93 94.28 297 31.07 1e-15 mol:protein length:297 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3dnf_A 60 380 + 321 Gaps:93 94.28 297 31.07 1e-15 mol:protein length:297 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szo_B 58 388 + 331 Gaps:82 89.94 328 29.83 1e-13 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szo_A 58 388 + 331 Gaps:82 89.94 328 29.83 1e-13 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szl_B 58 388 + 331 Gaps:82 89.94 328 29.83 1e-13 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szl_A 58 388 + 331 Gaps:82 89.94 328 29.83 1e-13 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3f7t_B 58 388 + 331 Gaps:82 89.94 328 29.83 1e-13 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3f7t_A 58 388 + 331 Gaps:82 89.94 328 29.83 1e-13 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szu_B 58 388 + 331 Gaps:82 89.94 328 29.49 3e-13 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szu_A 58 388 + 331 Gaps:82 89.94 328 29.49 3e-13 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_uniprot_sprot sp|Q94B35|ISPH_ARATH 13 388 + 376 Gaps:42 86.70 466 70.30 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic OS Arabidopsis thaliana GN ISPH PE 2 SV 1
blastp_uniprot_sprot sp|Q6AVG6|ISPH_ORYSJ 12 387 + 376 Gaps:42 88.02 459 69.80 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic OS Oryza sativa subsp. japonica GN ISPH PE 2 SV 1
blastp_uniprot_sprot sp|B8HWD3|ISPH_CYAP4 38 381 + 344 Gaps:47 90.12 405 59.73 1e-146 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|Q5N249|ISPH_SYNP6 42 382 + 341 Gaps:46 90.70 398 58.17 1e-145 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|Q31S64|ISPH_SYNE7 42 382 + 341 Gaps:46 90.70 398 58.17 1e-145 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Synechococcus elongatus (strain PCC 7942) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|Q3M8X6|ISPH_ANAVT 39 386 + 348 Gaps:46 91.54 402 57.88 3e-140 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|P58674|ISPH_NOSS1 39 386 + 348 Gaps:46 91.54 402 57.88 4e-140 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|B7K4V8|ISPH_CYAP8 31 384 + 354 Gaps:46 92.80 403 56.68 3e-139 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Cyanothece sp. (strain PCC 8801) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|B7KEG3|ISPH_CYAP7 35 386 + 352 Gaps:46 92.54 402 57.53 5e-139 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Cyanothece sp. (strain PCC 7424) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|Q8DK29|ISPH_THEEB 39 381 + 343 Gaps:46 90.30 402 58.68 2e-138 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Thermosynechococcus elongatus (strain BP-1) GN ispH PE 3 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 78 374 297 TIGR00216 "KEGG:00900+1.17.1.2","MetaCyc:PWY-7560","UniPathway:UPA00056","UniPathway:UPA00059" ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IPR003451
PANTHER 39 389 351 PTHR31619 none none none
Pfam 79 375 297 PF02401 "KEGG:00900+1.17.1.2","MetaCyc:PWY-7560","UniPathway:UPA00056","UniPathway:UPA00059" LytB protein IPR003451
PANTHER 39 389 351 PTHR31619:SF2 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting