Protein : Qrob_P0011050.2 Q. robur
Protein Identifier  ? Qrob_P0011050.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) 1.17.1.2 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. Code Enzyme  EC:1.17.1.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 467  
Kegg Orthology  K03527
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.
GO:0050992 dimethylallyl diphosphate biosynthetic process The chemical reactions and pathways resulting in the formation of dimethylallyl diphosphate.
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity Catalysis of the reaction: (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + NAD(P)H + H+ = isopentenyl diphosphate + NAD(P)+ + H2O. Note that (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate is an alternative name for 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101303948 1 465 + 465 Gaps:5 99.78 461 87.83 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_kegg lcl|pmum:103335515 1 465 + 465 Gaps:5 99.78 461 86.96 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic
blastp_kegg lcl|pxb:103964132 1 465 + 465 Gaps:6 99.78 460 86.71 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic
blastp_kegg lcl|mdm:103420733 1 465 + 465 Gaps:6 99.78 460 86.93 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0938310 1 465 + 465 Gaps:4 99.79 466 86.45 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase putative (EC:1.17.1.2)
blastp_kegg lcl|vvi:100267479 1 465 + 465 Gaps:1 99.78 465 86.42 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase-like
blastp_kegg lcl|gmx:100818067 1 465 + 465 Gaps:10 98.92 462 86.87 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_kegg lcl|mdm:103425754 1 465 + 465 Gaps:6 99.78 460 86.06 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic
blastp_kegg lcl|pop:POPTR_0009s11480g 1 465 + 465 Gaps:6 99.78 460 86.93 0.0 POPTRDRAFT_557296 chloroplast biogenesis family protein
blastp_kegg lcl|cmo:103495189 1 465 + 465 Gaps:3 99.78 463 87.88 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic-like
blastp_pdb 3dnf_B 111 457 + 347 Gaps:83 94.28 297 34.64 3e-25 mol:protein length:297 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3dnf_A 111 457 + 347 Gaps:83 94.28 297 34.64 3e-25 mol:protein length:297 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szo_B 109 465 + 357 Gaps:62 89.94 328 31.86 1e-20 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szo_A 109 465 + 357 Gaps:62 89.94 328 31.86 1e-20 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szl_B 109 465 + 357 Gaps:62 89.94 328 31.86 1e-20 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szl_A 109 465 + 357 Gaps:62 89.94 328 31.86 1e-20 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3f7t_B 109 465 + 357 Gaps:62 89.94 328 31.86 1e-20 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3f7t_A 109 465 + 357 Gaps:62 89.94 328 31.86 1e-20 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szu_B 109 465 + 357 Gaps:62 89.94 328 31.53 3e-20 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_pdb 3szu_A 109 465 + 357 Gaps:62 89.94 328 31.53 3e-20 mol:protein length:328 4-hydroxy-3-methylbut-2-enyl diphosphate redu
blastp_uniprot_sprot sp|Q94B35|ISPH_ARATH 1 465 + 465 Gaps:2 99.79 466 80.22 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic OS Arabidopsis thaliana GN ISPH PE 2 SV 1
blastp_uniprot_sprot sp|Q6AVG6|ISPH_ORYSJ 13 464 + 452 Gaps:5 97.82 459 79.29 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplastic OS Oryza sativa subsp. japonica GN ISPH PE 2 SV 1
blastp_uniprot_sprot sp|B8HWD3|ISPH_CYAP4 57 458 + 402 Gaps:7 98.02 405 66.50 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|Q5N249|ISPH_SYNP6 57 459 + 403 Gaps:6 99.75 398 63.73 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|Q31S64|ISPH_SYNE7 57 459 + 403 Gaps:6 99.75 398 63.73 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Synechococcus elongatus (strain PCC 7942) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|Q3M8X6|ISPH_ANAVT 57 463 + 407 Gaps:6 99.75 402 64.09 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|P58674|ISPH_NOSS1 57 463 + 407 Gaps:6 99.75 402 64.09 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|B0JVA7|ISPH_MICAN 57 458 + 402 Gaps:6 98.51 402 65.15 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Microcystis aeruginosa (strain NIES-843) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|B0C4N8|ISPH_ACAM1 57 462 + 406 Gaps:3 98.55 415 61.61 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Acaryochloris marina (strain MBIC 11017) GN ispH PE 3 SV 1
blastp_uniprot_sprot sp|B2IZV5|ISPH_NOSP7 57 463 + 407 Gaps:6 99.75 402 63.09 0.0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN ispH PE 3 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 113 452 340 PF02401 "KEGG:00900+1.17.1.2","MetaCyc:PWY-7560","UniPathway:UPA00056","UniPathway:UPA00059" LytB protein IPR003451
PANTHER 1 466 466 PTHR31619 none none none
TIGRFAM 113 451 339 TIGR00216 "KEGG:00900+1.17.1.2","MetaCyc:PWY-7560","UniPathway:UPA00056","UniPathway:UPA00059" ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IPR003451
PANTHER 1 466 466 PTHR31619:SF2 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting