Protein : Qrob_P0010810.2 Q. robur
Protein Identifier  ? Qrob_P0010810.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR24096:SF134 - LONG CHAIN ACYL-COA SYNTHETASE 2 (PTHR24096:SF134) Code Enzyme  EC:6.2.1.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 676  
Kegg Orthology  K01897
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103964146 5 675 + 671 Gaps:39 99.70 658 82.93 0.0 long chain acyl-CoA synthetase 2-like
blastp_kegg lcl|mdm:103449797 5 675 + 671 Gaps:39 99.70 658 82.93 0.0 long chain acyl-CoA synthetase 2
blastp_kegg lcl|pxb:103937564 5 675 + 671 Gaps:39 99.70 658 82.77 0.0 long chain acyl-CoA synthetase 2-like
blastp_kegg lcl|pxb:103964154 5 675 + 671 Gaps:40 99.70 659 82.65 0.0 long chain acyl-CoA synthetase 2-like
blastp_kegg lcl|fve:101296826 3 675 + 673 Gaps:39 99.85 659 81.31 0.0 long chain acyl-CoA synthetase 2-like
blastp_kegg lcl|pmum:103335495 5 675 + 671 Gaps:39 99.70 658 81.40 0.0 long chain acyl-CoA synthetase 2
blastp_kegg lcl|pxb:103937588 5 674 + 670 Gaps:39 99.54 658 81.22 0.0 long chain acyl-CoA synthetase 2-like
blastp_kegg lcl|pper:PRUPE_ppa002568mg 5 675 + 671 Gaps:39 99.70 658 81.40 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s11300g 5 674 + 670 Gaps:39 99.54 658 80.92 0.0 POPTRDRAFT_833082 LONG-CHAIN ACYL-COA SYNTHETASE 2 family protein
blastp_kegg lcl|vvi:100257137 4 674 + 671 Gaps:39 99.54 659 79.73 0.0 long chain acyl-CoA synthetase 2-like
blastp_pdb 1v26_B 46 550 + 505 Gaps:104 85.58 541 28.51 1e-23 mol:protein length:541 long-chain-fatty-acid-CoA synthetase
blastp_pdb 1v26_A 46 550 + 505 Gaps:104 85.58 541 28.51 1e-23 mol:protein length:541 long-chain-fatty-acid-CoA synthetase
blastp_pdb 1v25_B 46 550 + 505 Gaps:104 85.58 541 28.51 1e-23 mol:protein length:541 long-chain-fatty-acid-CoA synthetase
blastp_pdb 1v25_A 46 550 + 505 Gaps:104 85.58 541 28.51 1e-23 mol:protein length:541 long-chain-fatty-acid-CoA synthetase
blastp_pdb 1ult_B 46 550 + 505 Gaps:104 85.58 541 28.51 1e-23 mol:protein length:541 long chain fatty acid-CoA ligase
blastp_pdb 1ult_A 46 550 + 505 Gaps:104 85.58 541 28.51 1e-23 mol:protein length:541 long chain fatty acid-CoA ligase
blastp_pdb 3nyr_A 206 538 + 333 Gaps:58 56.83 505 34.15 1e-19 mol:protein length:505 Malonyl-CoA Ligase
blastp_pdb 3nyq_A 206 538 + 333 Gaps:58 56.83 505 34.15 1e-19 mol:protein length:505 Malonyl-CoA Ligase
blastp_pdb 3tsy_A 79 542 + 464 Gaps:85 43.82 979 27.74 2e-18 mol:protein length:979 Fusion Protein 4-coumarate--CoA ligase 1 Res
blastp_pdb 3ni2_A 79 537 + 459 Gaps:85 77.61 536 29.33 2e-18 mol:protein length:536 4-coumarate:CoA ligase
blastp_uniprot_sprot sp|Q9XIA9|LACS2_ARATH 9 671 + 663 Gaps:42 97.89 665 70.35 0.0 Long chain acyl-CoA synthetase 2 OS Arabidopsis thaliana GN LACS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C7W4|LACS3_ARATH 5 675 + 671 Gaps:41 98.95 665 55.32 0.0 Long chain acyl-CoA synthetase 3 OS Arabidopsis thaliana GN LACS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9T0A0|LACS4_ARATH 5 667 + 663 Gaps:40 97.45 666 55.93 0.0 Long chain acyl-CoA synthetase 4 OS Arabidopsis thaliana GN LACS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9T009|LACS5_ARATH 5 671 + 667 Gaps:40 98.05 666 55.44 0.0 Long chain acyl-CoA synthetase 5 OS Arabidopsis thaliana GN LACS5 PE 2 SV 1
blastp_uniprot_sprot sp|O22898|LACS1_ARATH 5 669 + 665 Gaps:42 98.64 660 47.93 0.0 Long chain acyl-CoA synthetase 1 OS Arabidopsis thaliana GN LACS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LKS5|LACS7_ARATH 59 669 + 611 Gaps:55 84.29 700 42.03 2e-149 Long chain acyl-CoA synthetase 7 peroxisomal OS Arabidopsis thaliana GN LACS7 PE 1 SV 2
blastp_uniprot_sprot sp|Q8LPS1|LACS6_ARATH 62 669 + 608 Gaps:57 83.74 701 43.61 3e-147 Long chain acyl-CoA synthetase 6 peroxisomal OS Arabidopsis thaliana GN LACS6 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JID6|ACSL1_CAVPO 58 671 + 614 Gaps:67 84.96 698 39.12 1e-133 Long-chain-fatty-acid--CoA ligase 1 OS Cavia porcellus GN ACSL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q55DR6|FCSA_DICDI 54 671 + 618 Gaps:54 89.66 667 40.13 4e-133 Fatty acyl-CoA synthetase A OS Dictyostelium discoideum GN fcsA PE 1 SV 1
blastp_uniprot_sprot sp|P41216|ACSL1_MOUSE 58 671 + 614 Gaps:67 84.84 699 39.46 7e-132 Long-chain-fatty-acid--CoA ligase 1 OS Mus musculus GN Acsl1 PE 1 SV 2

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 425 503 79 G3DSA:2.30.38.10 none none none
PANTHER 1 592 592 PTHR24096:SF134 none none none
PANTHER 1 592 592 PTHR24096 none none none
Gene3D 46 219 174 G3DSA:3.40.50.980 none none none
SUPERFAMILY 602 668 67 SSF56801 none none none
SUPERFAMILY 365 559 195 SSF56801 none none none
SUPERFAMILY 41 321 281 SSF56801 none none none
ProSitePatterns 213 224 12 PS00455 none Putative AMP-binding domain signature. IPR020845
PANTHER 619 671 53 PTHR24096:SF134 none none none
Pfam 53 510 458 PF00501 none AMP-binding enzyme IPR000873
Gene3D 220 316 97 G3DSA:3.40.50.980 none none none
Gene3D 362 414 53 G3DSA:3.40.50.980 none none none
PANTHER 619 671 53 PTHR24096 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting