Protein : Qrob_P0008340.2 Q. robur
Protein Identifier  ? Qrob_P0008340.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR13890:SF5 - MAGNESIUM TRANSPORTER MRS2-1-RELATED (PTHR13890:SF5) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 266  
Kegg Orthology  K16075
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0046873 metal ion transmembrane transporter activity Enables the transfer of metal ions from one side of a membrane to the other.
GO:0015095 magnesium ion transmembrane transporter activity Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other.
GO:0015693 magnesium ion transport The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101299016 16 265 + 250 none 56.05 446 92.80 5e-164 magnesium transporter MRS2-1-like
blastp_kegg lcl|tcc:TCM_027476 19 265 + 247 none 55.88 442 93.12 2e-163 Magnesium transporter 2 isoform 2
blastp_kegg lcl|pmum:103328184 16 265 + 250 none 56.05 446 91.60 2e-162 magnesium transporter MRS2-1
blastp_kegg lcl|pper:PRUPE_ppa005729mg 16 265 + 250 none 56.05 446 91.60 5e-162 hypothetical protein
blastp_kegg lcl|mdm:103405583 16 265 + 250 none 56.05 446 91.20 1e-160 magnesium transporter MRS2-1
blastp_kegg lcl|cit:102622939 19 265 + 247 none 56.01 441 91.50 1e-159 magnesium transporter MRS2-1-like
blastp_kegg lcl|cic:CICLE_v10025612mg 19 265 + 247 none 56.01 441 91.50 1e-159 hypothetical protein
blastp_kegg lcl|gmx:100779803 16 265 + 250 none 56.43 443 90.40 2e-159 magnesium transporter MRS2-1-like
blastp_kegg lcl|pvu:PHAVU_005G183100g 16 265 + 250 none 56.43 443 90.40 2e-159 hypothetical protein
blastp_kegg lcl|sly:101257182 16 265 + 250 Gaps:3 56.85 445 90.51 3e-159 magnesium transporter MRS2-1-like
blastp_uniprot_sprot sp|Q9S9N4|MRS21_ARATH 16 265 + 250 Gaps:1 56.33 442 87.55 4e-155 Magnesium transporter MRS2-1 OS Arabidopsis thaliana GN MRS2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SAH0|MRS2A_ARATH 19 265 + 247 none 55.76 443 86.23 3e-150 Magnesium transporter MRS2-10 OS Arabidopsis thaliana GN MRS2-10 PE 2 SV 1
blastp_uniprot_sprot sp|Q67UQ7|MRS2B_ORYSJ 16 265 + 250 Gaps:2 57.80 436 81.75 8e-143 Magnesium transporter MRS2-B OS Oryza sativa subsp. japonica GN MRS2-B PE 2 SV 1
blastp_uniprot_sprot sp|A2YFN7|MRS2B_ORYSI 16 265 + 250 Gaps:2 57.80 436 81.75 8e-143 Magnesium transporter MRS2-B OS Oryza sativa subsp. indica GN MRS2-B PE 3 SV 1
blastp_uniprot_sprot sp|Q0JBZ6|MRS2C_ORYSJ 16 265 + 250 Gaps:1 58.64 428 75.30 2e-131 Magnesium transporter MRS2-C OS Oryza sativa subsp. japonica GN MRS2-C PE 3 SV 3
blastp_uniprot_sprot sp|A2XV81|MRS2C_ORYSI 16 265 + 250 Gaps:1 58.64 428 75.30 2e-131 Magnesium transporter MRS2-C OS Oryza sativa subsp. indica GN H0311C03.3 PE 3 SV 2
blastp_uniprot_sprot sp|Q9ZPR4|MRS25_ARATH 15 265 + 251 Gaps:9 61.76 421 55.77 3e-79 Magnesium transporter MRS2-5 OS Arabidopsis thaliana GN MRS2-5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LJN2|MRS23_ARATH 16 263 + 248 Gaps:34 56.20 484 46.69 2e-65 Magnesium transporter MRS2-3 OS Arabidopsis thaliana GN MRS2-3 PE 1 SV 1
blastp_uniprot_sprot sp|Q304A0|MRS27_ARATH 16 263 + 248 Gaps:20 59.59 386 52.61 4e-64 Magnesium transporter MRS2-7 OS Arabidopsis thaliana GN MRS2-7 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L4S2|MRS2F_ORYSJ 15 232 + 218 Gaps:39 46.17 444 57.07 4e-57 Magnesium transporter MRS2-F OS Oryza sativa subsp. japonica GN MRS2-F PE 1 SV 1
rpsblast_kog gnl|CDD|37873 19 265 + 247 Gaps:27 53.14 414 59.55 2e-75 KOG2662 KOG2662 KOG2662 Magnesium transporters: CorA family [Inorganic ion transport and metabolism].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 147 253 107 PF01544 none CorA-like Mg2+ transporter protein IPR002523
Phobius 258 265 8 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 200 200 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 186 255 70 G3DSA:1.20.58.340 none none none
PANTHER 128 265 138 PTHR13890 none none IPR026573
Phobius 234 257 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 19 110 92 PTHR13890:SF5 none none none
PANTHER 128 265 138 PTHR13890:SF5 none none none
Coils 46 74 29 Coil none none none
SUPERFAMILY 202 255 54 SSF144083 none none none
Phobius 223 233 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 201 222 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 19 110 92 PTHR13890 none none IPR026573

2 Localization

Analysis Start End Length
TMHMM 200 222 22
TMHMM 237 259 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting