Protein : Qrob_P0008030.2 Q. robur
Protein Identifier  ? Qrob_P0008030.2 Organism . Name  Quercus robur
Score  81.1 Score Type  egn
Protein Description  (M=3) PTHR11562:SF21 - PROTEIN R02F11.3, ISOFORM B (PTHR11562:SF21) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 205  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0008324 cation transmembrane transporter activity Enables the transfer of cation from one side of the membrane to the other.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101215946 3 197 + 195 Gaps:7 47.06 408 66.15 9e-79 MTP8 metal tolerance protein 4-like
blastp_kegg lcl|csv:101229194 3 197 + 195 Gaps:7 47.06 408 66.15 9e-79 metal tolerance protein 4-like
blastp_kegg lcl|tcc:TCM_040309 7 197 + 191 Gaps:4 45.95 407 68.98 1e-75 Metal tolerance protein 4 isoform 1
blastp_kegg lcl|atr:s00024p00174810 7 197 + 191 Gaps:8 45.52 402 66.67 2e-72 AMTR_s00024p00174810 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10011857mg 3 197 + 195 Gaps:8 46.84 412 61.66 4e-71 hypothetical protein
blastp_kegg lcl|cmo:103492484 3 197 + 195 Gaps:7 46.94 409 65.10 7e-71 metal tolerance protein 4
blastp_kegg lcl|cam:101513702 13 197 + 185 Gaps:7 43.41 410 66.29 1e-70 metal tolerance protein 4-like
blastp_kegg lcl|cit:102618308 3 197 + 195 Gaps:8 46.84 412 61.66 2e-70 metal tolerance protein 4-like
blastp_kegg lcl|gmx:100785952 13 197 + 185 Gaps:7 43.52 409 64.61 3e-70 metal tolerance protein 4-like
blastp_kegg lcl|cic:CICLE_v10015422mg 23 197 + 175 Gaps:6 44.59 379 68.64 6e-70 hypothetical protein
blastp_uniprot_sprot sp|Q6Z7K5|MTP3_ORYSJ 5 197 + 193 Gaps:1 47.32 410 58.76 2e-68 Metal tolerance protein 3 OS Oryza sativa subsp. japonica GN MTP3 PE 2 SV 1
blastp_uniprot_sprot sp|Q10PP8|MTP4_ORYSJ 25 202 + 178 Gaps:5 43.58 397 62.43 3e-63 Metal tolerance protein 4 OS Oryza sativa subsp. japonica GN MTP4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M2P2|MTPC3_ARATH 29 197 + 169 Gaps:9 41.36 411 61.76 3e-58 Putative metal tolerance protein C3 OS Arabidopsis thaliana GN MTPC3 PE 3 SV 2
blastp_uniprot_sprot sp|Q5NA18|MTP5_ORYSJ 71 197 + 127 Gaps:11 30.36 415 50.00 2e-22 Metal tolerance protein 5 OS Oryza sativa subsp. japonica GN MTP5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SAJ7|MTP9_ARATH 59 197 + 139 Gaps:5 35.32 402 45.77 1e-21 Metal tolerance protein 9 OS Arabidopsis thaliana GN MTP9 PE 2 SV 2
blastp_uniprot_sprot sp|Q0DHJ5|MTP6_ORYSJ 71 197 + 127 Gaps:11 33.51 376 50.79 2e-21 Metal tolerance protein 6 OS Oryza sativa subsp. japonica GN MTP6 PE 2 SV 2
blastp_uniprot_sprot sp|O80632|MTP11_ARATH 71 197 + 127 Gaps:5 31.98 394 47.62 6e-21 Metal tolerance protein 11 OS Arabidopsis thaliana GN MTP11 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WU02|MTP10_ARATH 71 197 + 127 Gaps:2 29.67 428 47.24 6e-21 Metal tolerance protein 10 OS Arabidopsis thaliana GN MTP10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LDU0|MTP7_ORYSJ 43 197 + 155 Gaps:10 42.20 391 40.61 6e-19 Metal tolerance protein 7 OS Oryza sativa subsp. japonica GN MTP7 PE 2 SV 1
rpsblast_kog gnl|CDD|36698 28 196 + 169 none 41.02 412 24.85 8e-25 KOG1485 KOG1485 KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 114 134 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 25 197 173 PTHR11562:SF21 none none none
Phobius 1 113 113 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 112 197 86 G3DSA:1.20.1510.10 none none IPR027469
Phobius 162 181 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 110 198 89 SSF161111 none none none
Phobius 202 204 3 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 25 197 173 PTHR11562 none none IPR002524
Phobius 135 139 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 182 201 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 140 161 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

3 Localization

Analysis Start End Length
TMHMM 182 201 19
TMHMM 117 134 17
TMHMM 139 161 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting