Protein : Qrob_P0008020.2 Q. robur
Protein Identifier  ? Qrob_P0008020.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=3) PTHR11562:SF21 - PROTEIN R02F11.3, ISOFORM B (PTHR11562:SF21) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 182  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0008324 cation transmembrane transporter activity Enables the transfer of cation from one side of the membrane to the other.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0768880 1 180 + 180 none 44.44 405 80.00 9e-106 cation efflux protein/ zinc transporter putative
blastp_kegg lcl|cit:102617741 1 180 + 180 none 43.90 410 82.22 5e-105 metal tolerance protein 4-like
blastp_kegg lcl|sot:102582321 1 180 + 180 none 44.44 405 81.67 4e-104 metal tolerance protein 4-like
blastp_kegg lcl|pop:POPTR_0003s21540g 1 179 + 179 none 44.64 401 81.01 1e-103 POPTRDRAFT_800301 cation efflux family protein
blastp_kegg lcl|sly:101253924 1 180 + 180 none 44.44 405 81.11 1e-103 metal tolerance protein 4-like
blastp_kegg lcl|mdm:103414481 1 180 + 180 none 93.26 193 81.11 1e-103 metal tolerance protein 4-like
blastp_kegg lcl|sly:101254675 1 180 + 180 none 45.69 394 78.89 7e-103 metal tolerance protein 4-like
blastp_kegg lcl|vvi:100262068 1 180 + 180 none 43.27 416 78.89 2e-102 metal tolerance protein 4-like
blastp_kegg lcl|cam:101513702 1 180 + 180 none 43.90 410 80.56 5e-102 metal tolerance protein 4-like
blastp_kegg lcl|pop:POPTR_1020s00200g 1 179 + 179 none 46.02 389 78.77 8e-102 hypothetical protein
blastp_uniprot_sprot sp|Q10PP8|MTP4_ORYSJ 1 180 + 180 Gaps:1 45.59 397 76.80 1e-98 Metal tolerance protein 4 OS Oryza sativa subsp. japonica GN MTP4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M2P2|MTPC3_ARATH 1 179 + 179 Gaps:2 44.04 411 75.14 6e-95 Putative metal tolerance protein C3 OS Arabidopsis thaliana GN MTPC3 PE 3 SV 2
blastp_uniprot_sprot sp|Q6Z7K5|MTP3_ORYSJ 1 180 + 180 Gaps:1 44.15 410 70.17 1e-91 Metal tolerance protein 3 OS Oryza sativa subsp. japonica GN MTP3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SAJ7|MTP9_ARATH 1 170 + 170 Gaps:1 42.54 402 63.74 1e-73 Metal tolerance protein 9 OS Arabidopsis thaliana GN MTP9 PE 2 SV 2
blastp_uniprot_sprot sp|Q5NA18|MTP5_ORYSJ 1 172 + 172 Gaps:1 41.69 415 65.32 2e-73 Metal tolerance protein 5 OS Oryza sativa subsp. japonica GN MTP5 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WU02|MTP10_ARATH 1 170 + 170 Gaps:1 39.95 428 61.40 4e-72 Metal tolerance protein 10 OS Arabidopsis thaliana GN MTP10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LDU0|MTP7_ORYSJ 1 170 + 170 Gaps:1 43.73 391 61.99 6e-71 Metal tolerance protein 7 OS Oryza sativa subsp. japonica GN MTP7 PE 2 SV 1
blastp_uniprot_sprot sp|O80632|MTP11_ARATH 14 171 + 158 Gaps:1 40.36 394 66.04 2e-57 Metal tolerance protein 11 OS Arabidopsis thaliana GN MTP11 PE 2 SV 1
blastp_uniprot_sprot sp|Q0DHJ5|MTP6_ORYSJ 1 171 + 171 Gaps:40 35.37 376 67.67 2e-45 Metal tolerance protein 6 OS Oryza sativa subsp. japonica GN MTP6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZCC5|P34_RICPR 1 154 + 154 Gaps:4 51.33 300 27.27 4e-10 Protein p34 OS Rickettsia prowazekii (strain Madrid E) GN p34 PE 3 SV 1
rpsblast_cdd gnl|CDD|201849 1 167 + 167 Gaps:8 64.10 273 24.57 2e-22 pfam01545 Cation_efflux Cation efflux family. Members of this family are integral membrane proteins that are found to increase tolerance to divalent metal ions such as cadmium zinc and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells.
rpsblast_cdd gnl|CDD|30402 1 161 + 161 Gaps:5 54.61 304 26.51 5e-20 COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|211639 1 163 + 163 Gaps:8 63.06 268 23.67 2e-14 TIGR01297 CDF cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters a number of which have been shown to transport divalent cations of cobalt cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts often containing low-complexity sequence.
rpsblast_kog gnl|CDD|36698 1 175 + 175 Gaps:2 42.96 412 54.24 2e-58 KOG1485 KOG1485 KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 69 181 113 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 1 81 81 G3DSA:1.20.1510.10 none none IPR027469
Gene3D 84 161 78 G3DSA:3.30.70.1350 none none IPR027470
Phobius 1 49 49 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 2 83 82 SSF161111 none none none
PANTHER 1 180 180 PTHR11562 none none IPR002524
Phobius 50 68 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 85 163 79 SSF160240 none none none
Pfam 2 165 164 PF01545 none Cation efflux family IPR002524
PANTHER 1 180 180 PTHR11562:SF21 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 17   Secretory pathway 2 0.809 0.067 NON-PLANT 17