Protein : Qrob_P0007330.2 Q. robur
Protein Identifier  ? Qrob_P0007330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC (PTHR23076:SF54) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 678  
Kegg Orthology  K03798
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100788601 1 677 + 677 Gaps:3 100.00 678 86.28 0.0 ATP-dependent zinc metalloprotease FTSH 6 chloroplastic-like
blastp_kegg lcl|vvi:100266289 1 670 + 670 Gaps:1 58.38 1146 89.39 0.0 ATP-dependent zinc metalloprotease FTSH 6 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa002364mg 16 677 + 662 Gaps:6 97.80 681 87.09 0.0 hypothetical protein
blastp_kegg lcl|pmum:103330010 16 668 + 653 Gaps:4 56.66 1156 88.09 0.0 ATP-dependent zinc metalloprotease FTSH 6 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10011227mg 1 677 + 677 Gaps:3 100.00 676 85.06 0.0 hypothetical protein
blastp_kegg lcl|cit:102613766 1 676 + 676 Gaps:3 56.39 1197 85.04 0.0 ATP-dependent zinc metalloprotease FTSH 6 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0340700 1 676 + 676 Gaps:6 58.08 1157 85.27 0.0 Cell division protein ftsH putative (EC:3.6.4.3)
blastp_kegg lcl|pop:POPTR_0017s12030g 1 677 + 677 Gaps:2 100.00 677 87.00 0.0 POPTRDRAFT_778519 FtsH protease family protein
blastp_kegg lcl|pxb:103964982 16 668 + 653 Gaps:7 56.68 1161 85.71 0.0 ATP-dependent zinc metalloprotease FTSH 6 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_008G040800g 1 677 + 677 Gaps:15 100.00 664 84.49 0.0 hypothetical protein
blastp_pdb 2cea_F 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_E 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_D 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_C 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_B 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_A 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_F 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_E 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_D 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_C 209 657 + 449 Gaps:10 94.33 476 56.35 5e-175 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_uniprot_sprot sp|Q1PDW5|FTSH6_ARATH 2 675 + 674 Gaps:10 98.84 688 78.68 0.0 ATP-dependent zinc metalloprotease FTSH 6 chloroplastic OS Arabidopsis thaliana GN FTSH6 PE 2 SV 1
blastp_uniprot_sprot sp|Q67WJ2|FTSH6_ORYSJ 46 661 + 616 Gaps:5 90.23 686 75.77 0.0 ATP-dependent zinc metalloprotease FTSH 6 chloroplastic OS Oryza sativa subsp. japonica GN FTSH6 PE 3 SV 1
blastp_uniprot_sprot sp|O80860|FTSH2_ARATH 17 661 + 645 Gaps:16 93.38 695 71.49 0.0 ATP-dependent zinc metalloprotease FTSH 2 chloroplastic OS Arabidopsis thaliana GN FTSH2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8W585|FTSH8_ARATH 81 661 + 581 Gaps:6 85.40 685 76.92 0.0 ATP-dependent zinc metalloprotease FTSH 8 chloroplastic OS Arabidopsis thaliana GN FTSH8 PE 1 SV 1
blastp_uniprot_sprot sp|Q655S1|FTSH2_ORYSJ 47 661 + 615 Gaps:6 91.57 676 73.83 0.0 ATP-dependent zinc metalloprotease FTSH 2 chloroplastic OS Oryza sativa subsp. japonica GN FTSH2 PE 3 SV 1
blastp_uniprot_sprot sp|P51327|FTSH_PORPU 82 661 + 580 Gaps:9 92.20 628 65.28 0.0 ATP-dependent zinc metalloprotease FtsH OS Porphyra purpurea GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|O78516|FTSH_GUITH 82 661 + 580 Gaps:9 91.76 631 65.63 0.0 ATP-dependent zinc metalloprotease FtsH OS Guillardia theta GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q55700|FTSH2_SYNY3 82 661 + 580 Gaps:8 92.19 627 61.07 0.0 ATP-dependent zinc metalloprotease FtsH 2 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH2 PE 1 SV 1
blastp_uniprot_sprot sp|Q1XDF9|FTSH_PYRYE 82 661 + 580 Gaps:13 92.20 628 65.11 0.0 ATP-dependent zinc metalloprotease FtsH OS Pyropia yezoensis GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q8YMZ8|FTSH_NOSS1 79 657 + 579 Gaps:22 87.35 656 61.43 0.0 ATP-dependent zinc metalloprotease FtsH OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN ftsH PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 1 72 72 PS51318 none Twin arginine translocation (Tat) signal profile. IPR006311
Phobius 157 180 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 354 372 19 PS00674 none AAA-protein family signature. IPR003960
SUPERFAMILY 209 454 246 SSF52540 none none IPR027417
Phobius 1 156 156 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 84 661 578 PTHR23076 none none none
PANTHER 84 661 578 PTHR23076:SF54 none none none
SMART 247 386 140 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Gene3D 212 392 181 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 466 658 193 SSF140990 none none none
Pfam 251 383 133 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
TIGRFAM 170 655 486 TIGR01241 none FtsH_fam: ATP-dependent metallopeptidase HflB IPR005936
Pfam 444 654 211 PF01434 none Peptidase family M41 IPR000642
Phobius 181 677 497 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 393 459 67 G3DSA:1.10.8.60 none none none
Hamap 30 668 639 MF_01458 none ATP-dependent zinc metalloprotease FtsH [ftsH]. IPR005936

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting