Protein : Qrob_P0006190.2 Q. robur
Protein Identifier  ? Qrob_P0006190.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=27) PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED (PTHR32285:SF15) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 229  
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0 Synonyms

0 GO Terms

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007187mg 1 228 + 228 none 60.16 379 80.26 5e-133 hypothetical protein
blastp_kegg lcl|pmum:103331116 1 228 + 228 none 60.16 379 80.26 1e-132 protein trichome birefringence-like 36
blastp_kegg lcl|pxb:103947019 1 228 + 228 none 60.16 379 78.51 3e-131 protein trichome birefringence-like 36
blastp_kegg lcl|cic:CICLE_v10015623mg 1 228 + 228 Gaps:2 60.16 379 79.39 2e-130 hypothetical protein
blastp_kegg lcl|cit:102614463 1 228 + 228 Gaps:2 60.16 379 79.39 2e-130 protein YLS7-like
blastp_kegg lcl|vvi:100251081 19 228 + 210 Gaps:1 54.38 388 84.83 6e-129 uncharacterized LOC100251081
blastp_kegg lcl|tcc:TCM_044249 2 228 + 227 Gaps:11 58.67 375 82.27 5e-128 Trichome birefringence-like 36
blastp_kegg lcl|mdm:103438792 1 228 + 228 none 60.16 379 79.39 1e-125 protein trichome birefringence-like 36
blastp_kegg lcl|pvu:PHAVU_007G242600g 1 228 + 228 none 60.00 380 76.32 4e-123 hypothetical protein
blastp_kegg lcl|cmo:103489392 1 228 + 228 Gaps:3 60.05 378 80.18 8e-123 protein trichome birefringence-like 36
blastp_uniprot_sprot sp|Q940H3|TBL36_ARATH 12 228 + 217 Gaps:4 56.73 379 68.37 2e-101 Protein trichome birefringence-like 36 OS Arabidopsis thaliana GN TBL36 PE 2 SV 1
blastp_uniprot_sprot sp|Q1PFD9|TBL31_ARATH 43 222 + 180 Gaps:7 45.28 413 45.45 1e-51 Protein trichome birefringence-like 31 OS Arabidopsis thaliana GN TBL31 PE 2 SV 1
blastp_uniprot_sprot sp|Q94K00|TBL28_ARATH 55 223 + 169 Gaps:7 41.51 424 46.02 2e-48 Protein trichome birefringence-like 28 OS Arabidopsis thaliana GN TBL28 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LY46|TBL29_ARATH 56 223 + 168 Gaps:7 35.93 487 45.14 1e-47 Protein ESKIMO 1 OS Arabidopsis thaliana GN ESK1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LED3|TBL3_ARATH 56 220 + 165 Gaps:7 39.63 434 44.77 3e-47 Protein trichome birefringence-like 3 OS Arabidopsis thaliana GN TBL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SEZ9|TBL30_ARATH 3 221 + 219 Gaps:21 56.21 427 37.08 5e-47 Protein trichome birefringence-like 30 OS Arabidopsis thaliana GN TBL30 PE 2 SV 1
blastp_uniprot_sprot sp|Q67XC4|TBL40_ARATH 9 223 + 215 Gaps:11 57.14 364 40.38 5e-46 Protein trichome birefringence-like 40 OS Arabidopsis thaliana GN TBL40 PE 2 SV 2
blastp_uniprot_sprot sp|Q6DR10|TBL43_ARATH 54 225 + 172 Gaps:5 47.01 368 45.09 7e-45 Protein trichome birefringence-like 43 OS Arabidopsis thaliana GN TBL43 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUZ6|TBL44_ARATH 53 223 + 171 Gaps:3 42.79 402 43.02 5e-44 Protein PMR5 OS Arabidopsis thaliana GN PMR5 PE 2 SV 1
blastp_uniprot_sprot sp|F4IH21|TBL33_ARATH 6 220 + 215 Gaps:12 53.41 425 34.80 4e-43 Protein trichome birefringence-like 33 OS Arabidopsis thaliana GN TBL33 PE 2 SV 1
rpsblast_cdd gnl|CDD|178236 10 222 + 213 Gaps:13 56.33 387 41.28 3e-46 PLN02629 PLN02629 powdery mildew resistance 5.
rpsblast_cdd gnl|CDD|206010 108 223 + 116 Gaps:1 43.33 270 49.57 2e-35 pfam13839 PC-Esterase GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p. The PC-Esterase family is comprised of Cas1p the Homo sapiens C7orf58 Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1 animal FAM55D proteins and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain in addition with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5 ESK1 TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain.
rpsblast_cdd gnl|CDD|206583 56 107 + 52 Gaps:1 96.36 55 62.26 1e-19 pfam14416 PMR5N PMR5 N terminal Domain. The plant family with PMR5 ESK1 TBL3 etc have a N-terminal C rich predicted sugar binding domain followed by the PC-Esterase (acyl esterase) domain.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 15 228 214 PTHR32285 none none IPR029962
Phobius 8 19 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 55 107 53 PF14416 none PMR5 N terminal Domain IPR025846
Pfam 108 224 117 PF13839 none GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p IPR026057
Phobius 20 24 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 15 228 214 PTHR32285:SF15 none none IPR029986
Phobius 25 228 204 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

1 Localization

Analysis Start End Length
SignalP_EUK 1 27 26

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.974 0.016 NON-PLANT 26