Protein : Qrob_P0006160.2 Q. robur
Protein Identifier  ? Qrob_P0006160.2 Organism . Name  Quercus robur
Score  84.1 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 258  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103438791 48 257 + 210 none 98.59 213 71.43 2e-109 germin-like protein subfamily 3 member 2
blastp_kegg lcl|cit:102623465 54 257 + 204 none 95.77 213 75.98 3e-109 germin-like protein subfamily 3 member 2-like
blastp_kegg lcl|pper:PRUPE_ppa016341mg 46 257 + 212 Gaps:2 99.53 211 70.95 5e-108 hypothetical protein
blastp_kegg lcl|fve:101314126 46 257 + 212 Gaps:4 100.00 214 71.50 5e-108 germin-like protein subfamily 3 member 2-like
blastp_kegg lcl|cam:101492536 46 256 + 211 Gaps:3 99.52 209 71.15 2e-107 germin-like protein subfamily 3 member 2-like
blastp_kegg lcl|cic:CICLE_v10018008mg 54 257 + 204 none 95.77 213 75.00 3e-107 hypothetical protein
blastp_kegg lcl|gmx:100803113 65 256 + 192 Gaps:2 82.25 231 77.37 4e-106 germin-like protein subfamily 3 member 2-like
blastp_kegg lcl|tcc:TCM_044263 46 257 + 212 Gaps:8 98.59 213 72.86 7e-106 Germin-like protein 18
blastp_kegg lcl|pvu:PHAVU_007G021700g 44 255 + 212 Gaps:3 93.72 223 71.29 2e-105 hypothetical protein
blastp_kegg lcl|sly:101267954 46 257 + 212 none 100.00 212 67.92 5e-105 germin-like protein subfamily 3 member 2-like
blastp_pdb 2et7_A 67 255 + 189 Gaps:11 98.51 201 38.89 3e-37 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_B 67 255 + 189 Gaps:11 98.51 201 38.89 1e-36 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 67 255 + 189 Gaps:11 98.51 201 38.89 1e-36 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 67 255 + 189 Gaps:11 98.51 201 38.38 2e-36 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 67 255 + 189 Gaps:11 98.51 201 38.38 2e-36 mol:protein length:201 OXALATE OXIDASE
blastp_uniprot_sprot sp|Q9SR72|GL32_ARATH 64 256 + 193 Gaps:7 88.11 227 58.00 9e-83 Germin-like protein subfamily 3 member 2 OS Arabidopsis thaliana GN At3g10080 PE 2 SV 1
blastp_uniprot_sprot sp|Q6ESF0|GL24_ORYSJ 67 256 + 190 Gaps:13 86.90 229 52.76 9e-72 Germin-like protein 2-4 OS Oryza sativa subsp. japonica GN Os02g0532500 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M263|GL24_ARATH 56 256 + 201 Gaps:7 94.55 220 43.75 3e-49 Germin-like protein subfamily 2 member 4 OS Arabidopsis thaliana GN GLP10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FZ27|GL22_ARATH 46 255 + 210 Gaps:5 98.17 219 41.40 5e-49 Germin-like protein subfamily 2 member 2 OS Arabidopsis thaliana GN At1g02335 PE 2 SV 1
blastp_uniprot_sprot sp|Q6K5Q0|GL21_ORYSJ 51 254 + 204 Gaps:9 98.61 216 42.25 2e-48 Putative germin-like protein 2-1 OS Oryza sativa subsp. japonica GN Os02g0491600 PE 3 SV 1
blastp_uniprot_sprot sp|Q6I544|GL52_ORYSJ 66 257 + 192 Gaps:5 88.24 221 44.10 3e-48 Germin-like protein 5-1 OS Oryza sativa subsp. japonica GN Os05g0277500 PE 2 SV 1
blastp_uniprot_sprot sp|O65252|GL25_ARATH 74 256 + 183 Gaps:4 86.85 213 42.70 3e-48 Probable germin-like protein subfamily 2 member 5 OS Arabidopsis thaliana GN At5g26700 PE 2 SV 2
blastp_uniprot_sprot sp|P93000|GL23_ARATH 50 256 + 207 Gaps:7 96.80 219 40.57 2e-47 Germin-like protein subfamily 2 member 3 OS Arabidopsis thaliana GN GLP8 PE 2 SV 1
blastp_uniprot_sprot sp|Q6K5P8|GL23_ORYSJ 64 254 + 191 Gaps:7 88.79 223 43.94 1e-46 Putative germin-like protein 2-3 OS Oryza sativa subsp. japonica GN Os02g0491800 PE 3 SV 1
blastp_uniprot_sprot sp|Q94EG3|NEC1_NICLS 36 256 + 221 Gaps:7 96.94 229 40.54 3e-46 Nectarin-1 OS Nicotiana langsdorffii x Nicotiana sanderae GN NECI PE 1 SV 1
rpsblast_cdd gnl|CDD|197904 111 247 + 137 Gaps:4 95.21 146 30.22 5e-29 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 103 247 + 145 Gaps:15 99.28 139 35.51 4e-22 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 27 256 230 PTHR31238 none none none
Phobius 12 30 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 67 255 189 G3DSA:2.60.120.10 none none IPR014710
Pfam 110 245 136 PF00190 none Cupin IPR006045
Phobius 68 257 190 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 68 254 187 SSF51182 none none IPR011051
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 31 49 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 103 248 146 SM00835 none Cupin IPR006045
PRINTS 213 228 16 PR00325 none Germin signature IPR001929
PRINTS 180 200 21 PR00325 none Germin signature IPR001929
PRINTS 150 170 21 PR00325 none Germin signature IPR001929
Phobius 50 67 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 27 256 230 PTHR31238:SF8 none none none

1 Localization

Analysis Start End Length
TMHMM 12 31 19

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 2 0.833 0.095 NON-PLANT 28