Protein : Qrob_P0004350.2 Q. robur
Protein Identifier  ? Qrob_P0004350.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) K02874 - large subunit ribosomal protein L14 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 118  
Kegg Orthology  K02874
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0015934 large ribosomal subunit The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100241180 1 117 + 117 none 70.06 167 88.03 9e-66 50S ribosomal protein L14-like
blastp_kegg lcl|pper:PRUPE_ppa012469mg 1 117 + 117 Gaps:2 70.83 168 85.71 3e-61 hypothetical protein
blastp_kegg lcl|mus:103983529 1 117 + 117 none 69.23 169 78.63 2e-60 50S ribosomal protein HLP mitochondrial
blastp_kegg lcl|pda:103710523 1 117 + 117 none 61.26 191 80.34 4e-60 50S ribosomal protein HLP mitochondrial
blastp_kegg lcl|atr:s00092p00112020 1 117 + 117 none 100.00 117 82.05 9e-59 AMTR_s00092p00112020 hypothetical protein
blastp_kegg lcl|cam:101495811 1 117 + 117 none 70.48 166 87.18 4e-58 50S ribosomal protein L14-like
blastp_kegg lcl|sly:101260032 1 117 + 117 none 69.64 168 81.20 7e-58 50S ribosomal protein L14-like
blastp_kegg lcl|pda:103706445 1 117 + 117 none 66.86 175 78.63 8e-58 50S ribosomal protein HLP mitochondrial-like
blastp_kegg lcl|sot:102592234 1 117 + 117 none 69.64 168 81.20 9e-58 60S ribosomal protein L14 mitochondrial-like
blastp_kegg lcl|cam:101505032 1 117 + 117 none 70.48 166 87.18 9e-58 50S ribosomal protein L14-like
blastp_pdb 4dhc_O 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S Ribosomal Protein L14
blastp_pdb 4dha_O 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S Ribosomal Protein L14
blastp_pdb 4abs_O 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S RIBOSOMAL PROTEIN L14
blastp_pdb 3zvp_O 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S RIBOSOMAL PROTEIN L14
blastp_pdb 3uzn_N 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uzk_N 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uzh_N 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uzf_N 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uz9_N 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S ribosomal protein L14
blastp_pdb 3uz8_N 2 116 + 115 Gaps:2 95.90 122 50.43 8e-32 mol:protein length:122 50S ribosomal protein L14
blastp_uniprot_sprot sp|Q1RHN1|RL14_RICBR 1 116 + 116 Gaps:2 96.72 122 56.78 3e-37 50S ribosomal protein L14 OS Rickettsia bellii (strain RML369-C) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|A8GVC4|RL14_RICB8 1 116 + 116 Gaps:2 96.72 122 56.78 3e-37 50S ribosomal protein L14 OS Rickettsia bellii (strain OSU 85-389) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|Q68W88|RL14_RICTY 1 116 + 116 Gaps:2 96.72 122 56.78 3e-37 50S ribosomal protein L14 OS Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|Q9ZCR5|RL14_RICPR 1 116 + 116 Gaps:2 96.72 122 56.78 3e-37 50S ribosomal protein L14 OS Rickettsia prowazekii (strain Madrid E) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|Q4UMR9|RL14_RICFE 1 116 + 116 Gaps:2 96.72 122 57.63 6e-37 50S ribosomal protein L14 OS Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|A8EZK6|RL14_RICCK 1 116 + 116 Gaps:2 96.72 122 57.63 9e-37 50S ribosomal protein L14 OS Rickettsia canadensis (strain McKiel) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|A8GPE0|RL14_RICAH 1 116 + 116 Gaps:2 96.72 122 56.78 1e-36 50S ribosomal protein L14 OS Rickettsia akari (strain Hartford) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|C4K2G9|RL14_RICPU 1 116 + 116 Gaps:2 96.72 122 56.78 1e-36 50S ribosomal protein L14 OS Rickettsia peacockii (strain Rustic) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|Q92GX6|RL14_RICCN 1 116 + 116 Gaps:2 96.72 122 56.78 1e-36 50S ribosomal protein L14 OS Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN rplN PE 3 SV 1
blastp_uniprot_sprot sp|C3PP97|RL14_RICAE 1 116 + 116 Gaps:2 96.72 122 56.78 1e-36 50S ribosomal protein L14 OS Rickettsia africae (strain ESF-5) GN rplN PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 55 81 27 PS00049 none Ribosomal protein L14 signature. IPR019972
TIGRFAM 2 116 115 TIGR01067 none rplN_bact: ribosomal protein uL14 IPR005745
PANTHER 1 117 117 PTHR11761 none none IPR000218
SUPERFAMILY 2 116 115 SSF50193 none none IPR023571
Pfam 2 116 115 PF00238 none Ribosomal protein L14p/L23e IPR000218
PANTHER 1 117 117 PTHR11761:SF3 none none none
Gene3D 2 116 115 G3DSA:2.40.150.20 none none IPR023571

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting